Trifolium pratense (red clover): 123920384
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Entry
123920384 CDS
T08949
Name
(RefSeq) proteasome subunit alpha type-6-like
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
123920384
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123920384
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tpra03051
]
123920384
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
123920384
Peptidases and inhibitors [BR:
tpra01002
]
Threonine peptidases
Family T1: proteasome family
123920384
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
123920384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AP-5_subunit_s1
Motif
Other DBs
NCBI-GeneID:
123920384
NCBI-ProteinID:
XP_045828610
LinkDB
All DBs
Position
LG4:57125392..57136886
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AA seq
246 aa
AA seq
DB search
MSRGSGGGYDRYITIFSPEGRLFQVEYAFKAVKSAGNTSIGVRGKDSVCVVTQKKVPDKL
LDQTSVTHLFPITKYLGLLATGITADARTLVQQARNEAAEYRFRYGYEMPVDVLSKWIAD
KSQVYTQHASMRPLGVVSMVLGIDDEYGPQLYKCDPAGHYFGYKAASAGLKDQEAINFLE
KRMKNDPSFTYAETVQTAISALQSVLQEDFKATEIEVGVVQMDNPEFRVLSTEEVDEHLT
SISERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaggaagcggaggtggatacgatcgttacatcactattttctcccccgagggt
cgtctctttcaagtcgagtatgctttcaaggctgttaagtctgctggtaatacctcgatt
ggcgtaagaggaaaagattcggtttgtgtggttactcagaaaaaggttccggacaagctg
ttggaccagacaagtgttacacatctctttcccatcacaaagtatcttggtttactggcc
actggcatcacggctgatgccaggacactagttcaacaagcaagaaatgaagcagctgag
tatcgctttagatatggatatgagatgcctgtggatgtgctgtctaaatggattgcagac
aaatcacaagtctatactcaacatgcttctatgagaccacttggagtagtttctatggta
ttgggtattgatgacgaatatgggccccaactttacaaatgtgaccctgctggtcattac
tttggttacaaggccgcaagtgctggattgaaagaccaagaggccatcaatttcttggaa
aagaggatgaagaatgacccttcgtttacctatgcggagacagttcagactgccatttct
gccttgcaatcagttcttcaagaggattttaaggccactgagattgaggttggagttgtg
cagatggataatccagaatttagagttctgtccaccgaggaagttgatgaacacttgact
tcaataagcgagcgtgattga
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