Trifolium pratense (red clover): 123920406
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Entry
123920406 CDS
T08949
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123920406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123920406
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123920406
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Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
123920406
NCBI-ProteinID:
XP_045828621
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Position
LG4:713005..717205
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AA seq
629 aa
AA seq
DB search
MECYACTQVGVPLFHSTSCDSYGKPFDPTSKRVKIWNRALLFARGVALAIDPIFFYALSI
GRGGSPCLYMDGGLAFLATVARSAIDAIHLLHILLQFRLPYVLRESLVVGRGRLVWDARA
IARHYMRSLRGFWFDVFVILPVPQVVFWVVVPKLIKEERIKILMTTMLLIFLFQFLPKVY
HSISMMRRMQKVTGYIFGTICWGFGLNLIAYFFASQVAGACCYVLAIQRVASCLQQQCDR
SVGCSLPLSCSEEICYRSYSLFPPGTIGNSCGGNSTLIPPVCLDVEGPFRYGIYKWALPV
ISSDSLADKILDPIFWGLKTFSTFGNNLEPTSNWLEVIFSICIVLAGILLSTLLIGNIQV
FLEGVLAKKRNTQLRRRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEELIKDL
PEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSRDEKIIREGDLVPRMV
FIVRGSIRRTQNLSKGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTE
AFGLDAQNLRYITDHFRYKFANERLKRTARYHSSNWRTWAAVNIQVAYRRYRQRTRGLVT
LVRDNGGTERTLWQYAAMFTSTRPHDHLE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttatgcttgcacacaagtaggtgtgccacttttccactccaccagctgtgat
agctacggaaaacctttcgatccaacaagcaagcgcgtgaaaatatggaaccgcgctttg
ttatttgcgcgtggtgttgcattggccattgaccccatatttttctacgcgctgtccata
gggagaggaggttccccgtgtttgtatatggacggtggtttggcattccttgctactgtg
gcgcggtcggctattgatgcgattcatctgcttcatattctgctgcagtttagattaccg
tatgtgttgagagaatcacttgtggttggacgtgggagactcgtgtgggacgcacgtgcc
attgctcgtcattatatgagatctctcagaggcttttggttcgatgtttttgttattctt
ccggtgcctcaggttgtattttgggtagtagtaccaaaattgataaaagaagagaggatt
aaaatactgatgacaacaatgctattgatttttttgttccaatttctccctaaggtttac
catagcatatccatgatgagaagaatgcaaaaagtcacaggctatatctttggcaccatt
tgttggggatttggactcaatcttatagcttatttctttgcctctcaggttgctggagcg
tgttgttatgtccttgccattcaacgcgttgcatcttgtcttcaacagcaatgtgacagg
tctgttggatgcagtctccctctgtcatgctcagaggaaatatgttatcggtcatactca
ttgtttccaccaggaaccattggaaattcatgtggtggaaactcaacattgataccgcct
gtgtgcttagatgtcgaaggacctttcagatatgggatctacaaatgggcacttcctgtc
atatccagcgattccttggctgacaagattcttgatcccattttttggggtttgaagact
ttcagcacttttggaaataatcttgaacccacaagtaactggctagaagtgattttcagt
atatgcattgtacttgctggaatactactttccactctgttgattggtaacatccaggta
ttcttagaaggagtcctggcaaagaagagaaacacgcagcttagacgtcgtgacatggaa
tggtggatgaggaggaggcagttgccatcccggttaagacaaagggttcggcattttgaa
cgtcagagatgggcagccatgggaggagaagatgagatggaggaacttatcaaagactta
cccgagggcctgaggagagacatcaagcgctacctttgcttggacctgattaaaaaggta
ccattattccataacttggatgatcttattcttgacaacatctgtgacagagtgaagccc
ctagtcttctctagagatgaaaagataattagagaaggtgatcttgtacccaggatggtg
tttattgtccgtggaagcataaggcgaacccaaaatctcagcaaaggcatggtagcaaca
agtgtccttgaaccaggtggctttttaggcgatgaacttctttcatggtgcctcagacgc
ccttttatagaccggcttccggcctcctcagctacatttgtgtgtctcgaatcaacagaa
gcattcggtcttgatgctcaaaatttgaggtacataactgatcacttccggtacaaattc
gcaaacgagaggcttaagagaacggcgagataccactcgtcgaattggagaacatgggct
gctgtcaacattcaagttgcttatagacgttacaggcaaaggactagaggtctagtgact
cttgtaagggacaatggaggcaccgagcgcacactctggcagtatgctgcaatgttcacg
tcaactaggccacatgatcaccttgaatga
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