Trifolium pratense (red clover): 123920424
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Entry
123920424 CDS
T08949
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123920424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123920424
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123920424
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Paralog
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Motif
Pfam:
Ion_trans
Ion_trans_2
TMEMspv1-c74-12
Motif
Other DBs
NCBI-GeneID:
123920424
NCBI-ProteinID:
XP_045828635
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Position
LG4:1069206..1072756
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AA seq
429 aa
AA seq
DB search
MESLQKFTRAVTTWKIWGLSGKALDPRSKRVQIWNRALLLARGVALVMDPLFVYALSIGR
KGGSPCLYMDGGLALVFTVARSLLDAVHLLHIGLQLRSAYVSRKSLVVGCGELVWDARAT
ASAYMRAFKGFWFDIFVILPVPQVVFWIVVPKLIREERIKIMMTTMLLMFLFQFLPKVCH
SISMMRRMQNVTGYIFGTLSWGFGLNLIAYFFASHVVGACWYVLAIQRIASCLQQQCERS
AGCNLALSCSEEICSRSLCGGNSTMMSKLVCLDVKGPFRHGIYRWALNVVSSNSLAFRIL
YPIYWGLTTFSTFGNDLEPTSNWLEVIFSICIIVAGLLLFTLFIGNIQVFLDGVMEKKRN
MQLRSRDMEWWMRRRQLPSRLRQRVRHFERERWAATGGEDEMELMKDLPEGLRRDIEQYL
IEDDGDQRA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttgcagaaattcacaagagcggttacaacatggaaaatttggggactctca
ggaaaagcattagatccaagaagcaagcgcgtgcaaatatggaaccgcgcgctgttatta
gcgcgcggtgttgctttggtgatggatccactgtttgtctatgcactttccatagggaga
aaaggaggttcgccatgtttgtatatggacggagggttggcgttggttttcacagtggcg
cgttcgcttcttgatgcagttcatttgcttcacattgggttgcagcttagatcagcatat
gtgtctagaaaatcccttgttgttggatgtggggaacttgtgtgggacgcacgcgccact
gcttctgcctatatgagagctttcaaaggattctggtttgatatttttgttattcttcct
gtgcctcaggttgtattttggatagtagtaccaaaattgataagagaagagaggattaaa
ataatgatgacaacaatgctattgatgtttttgttccaatttctccctaaggtttgtcat
agcatatccatgatgagaagaatgcaaaatgtcacgggctatatctttggcaccctttct
tggggatttggactcaatctcatagcttatttttttgcctctcatgttgttggagcgtgt
tggtatgtccttgcgattcaacgcattgcatcatgccttcaacagcaatgtgaaagatct
gctggatgcaatctcgctctatcatgctcagaggagatatgttctcggtcattgtgtggt
ggaaactcaacaatgatgagtaagcttgtgtgcttagatgttaaaggacctttcagacat
ggcatctaccgatgggcacttaatgttgtatccagcaattccttggctttcaggattctt
tatcccatttattggggtttgacgaccttcagcacttttggaaatgatcttgaacccaca
agtaactggctagaagtgattttcagtatatgcattatagttgccggactactacttttc
actctgtttattggtaacattcaggtattcttagatggagtcatggaaaagaagagaaac
atgcagcttagaagtcgtgacatggaatggtggatgaggaggaggcagttgccctcccga
ttaagacaaagagttcggcattttgaacgtgagagatgggcagccacaggaggagaagat
gaaatggaactcatgaaggacttacccgagggtctgaggagagacattgagcagtatctg
atagaggatgatggagaccaaagagcatag
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