KEGG   Trifolium pratense (red clover): 123920474
Entry
123920474         CDS       T08949                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123920474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123920474
   03036 Chromosome and associated proteins [BR:tpra03036]
    123920474
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123920474
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123920474
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 123920474
NCBI-ProteinID: XP_045828685
LinkDB
Position
LG1:complement(9839616..9844965)
AA seq 345 aa
MSGFGATNANPNKSHEVTQPPTDSVSSLAFSPKANFLIATSWDNQVRCWEVSKNGTALNT
TPKASISHDHPVLCSAWKDDGTTVFSGGCDKQVKMWSLLSGGQPVTVAMHDAPIKEVAWI
PEMNLLATGSWDKTVKYWDTRQSNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIIFNLQ
NPQTEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHRES
NDIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMQRCNQPIPCGAFNNDGSIY
AYAVCYDWSKGAENHNPTTAKNYIYLHLPQDTEVKGKPRAASGKR
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtcaggtttcggagccacaaacgcaaatccaaacaaatcccacgaggttacgcaacca
ccaactgattctgtttcgagtcttgctttcagtcccaaagccaatttcctcattgctact
tcttgggacaatcaggttcgatgttgggaggtttcgaagaatggaactgctcttaacact
acacccaaagcttctatttctcatgatcaccccgtcttgtgctctgcttggaaggatgat
ggaaccacagttttttctggaggttgtgacaagcaggtcaagatgtggtcgcttttgtct
ggagggcaaccagtgactgttgccatgcatgatgcgcccatcaaagaagttgcgtggata
cccgagatgaatctcttagccacaggaagctgggacaaaaccgtaaagtattgggatact
aggcagtccaatccagtgcatactcagcaactccctgatcgctgttattcgatgtcagtg
agacatcctctgatggttgtgggaactgcagataggaatctgattatcttcaacttgcag
aatccacagactgagtacaaaagaatagtatcacccctgaaataccagacaagatgtgtt
gctgcatttccagatcaacaaggctttttggttggctcaatagaaggaagggttggagta
catcaccttgatgatgcacagcaaagcaagaattttacttttaaatgccacagagaaagc
aatgacatatattcagtcaattccttaaatttccatcctgtacatcacacttttgcaact
gctggatctgatggtgcttttaatttctgggataaggacagtaaacaaagactcaaggct
atgcaaaggtgtaatcagcccataccctgcggtgcattcaataatgatggttccatatat
gcttacgcggtttgttatgattggagcaaaggtgcagaaaatcacaatccgactaccgca
aagaactacatttatttgcacttaccacaggacactgaggttaaaggcaagccacgagct
gcatcgggcaaaagatga

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