Trifolium pratense (red clover): 123920474
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Entry
123920474 CDS
T08949
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123920474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123920474
03036 Chromosome and associated proteins [BR:
tpra03036
]
123920474
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123920474
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123920474
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
123920474
NCBI-ProteinID:
XP_045828685
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Position
LG1:complement(9839616..9844965)
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AA seq
345 aa
AA seq
DB search
MSGFGATNANPNKSHEVTQPPTDSVSSLAFSPKANFLIATSWDNQVRCWEVSKNGTALNT
TPKASISHDHPVLCSAWKDDGTTVFSGGCDKQVKMWSLLSGGQPVTVAMHDAPIKEVAWI
PEMNLLATGSWDKTVKYWDTRQSNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIIFNLQ
NPQTEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHRES
NDIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMQRCNQPIPCGAFNNDGSIY
AYAVCYDWSKGAENHNPTTAKNYIYLHLPQDTEVKGKPRAASGKR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttcggagccacaaacgcaaatccaaacaaatcccacgaggttacgcaacca
ccaactgattctgtttcgagtcttgctttcagtcccaaagccaatttcctcattgctact
tcttgggacaatcaggttcgatgttgggaggtttcgaagaatggaactgctcttaacact
acacccaaagcttctatttctcatgatcaccccgtcttgtgctctgcttggaaggatgat
ggaaccacagttttttctggaggttgtgacaagcaggtcaagatgtggtcgcttttgtct
ggagggcaaccagtgactgttgccatgcatgatgcgcccatcaaagaagttgcgtggata
cccgagatgaatctcttagccacaggaagctgggacaaaaccgtaaagtattgggatact
aggcagtccaatccagtgcatactcagcaactccctgatcgctgttattcgatgtcagtg
agacatcctctgatggttgtgggaactgcagataggaatctgattatcttcaacttgcag
aatccacagactgagtacaaaagaatagtatcacccctgaaataccagacaagatgtgtt
gctgcatttccagatcaacaaggctttttggttggctcaatagaaggaagggttggagta
catcaccttgatgatgcacagcaaagcaagaattttacttttaaatgccacagagaaagc
aatgacatatattcagtcaattccttaaatttccatcctgtacatcacacttttgcaact
gctggatctgatggtgcttttaatttctgggataaggacagtaaacaaagactcaaggct
atgcaaaggtgtaatcagcccataccctgcggtgcattcaataatgatggttccatatat
gcttacgcggtttgttatgattggagcaaaggtgcagaaaatcacaatccgactaccgca
aagaactacatttatttgcacttaccacaggacactgaggttaaaggcaagccacgagct
gcatcgggcaaaagatga
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integrated database retrieval system