Trifolium pratense (red clover): 123920485
Help
Entry
123920485 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123920485
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123920485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123920485
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123920485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
123920485
NCBI-ProteinID:
XP_045828705
LinkDB
All DBs
Position
LG4:63269..73016
Genome browser
AA seq
584 aa
AA seq
DB search
MAYMKRLVIELSKPDLRENAIRVLSKLFHELAPLLWNSVGTIEVLLQEITSIYPNLSPPT
LSHAQSTRVCNVIALLRCLASHPDTMSLIMAMIPMYLYPFLQTTNTLPQFDWLRLASLGV
IGVLVKARSKEVIPFLLSNEIIPLCLHSMEIGNELSKSAATFILQKILMDEDGLAYVCAT
AHRFFAVSRILDMVMEYVQRQPSSRLLKLIIPCYSRLSENRGRAGIALTSSLPGVFANPA
FINSLREDPTTWRWAEQLYENIRKNRFQSDRMYDIVWSTSSSGYVSFVAPLHVSSQSSSA
IDWTAYMERLVIELSKPDLRENAIRVLSKLFHELAPLLWNSVGTIAVLLQEIISIYPNLS
PPTLSPTQSTRVCNVLCVASHPNTRMSLIIACIPQYVYPFLETTNILPQFDYLRVASLGV
IGALVKANSKEVILFLLSTEIIPLCLRSMEIGKELSKNVATFILQKILLDDDGLAYVCAT
TDRFFAVRRILDMVLESHERQPSTQLLKLIIPCYSRLSQNRRAGIALTSSLPVVFANPAF
INSLREDPTTWRWMEQLYENIRKNHVQSARTEVQMDDIVDKLCV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcatacatgaaacgccttgttattgaactcagcaaacctgatctcagagaaaatgct
attcgtgtgctctccaagttatttcatgaacttgcacctttattgtggaattctgttggt
actattgaagtacttttacaggaaataacttccatatatcctaatctttcaccgccaact
ctttctcatgcacaatcaactcgagtgtgcaatgttattgcactacttcggtgtctggca
tctcaccctgatacaatgtcactcatcatggctatgatacctatgtatctgtaccctttc
cttcaaacgacaaataccttaccccaatttgactggttgaggcttgcgagtcttggagtc
attggtgtcttggtaaaggccagaagcaaagaagttataccttttcttctttcaaatgaa
attattccattgtgtttgcatagcatggaaattggcaacgaattgtcaaaatcagctgca
actttcatcctacaaaaaattttgatggatgaagatggtttagcttatgtgtgtgccacg
gcacaccgcttctttgctgtaagtcgaattttggacatggtgatggaatatgttcagaga
caaccttcatctcggcttttgaagcttataattccatgttattctcgcttgtctgaaaat
cgcggtagggctggaattgcattaacaagctctcttccgggtgtgtttgcaaaccccgct
ttcattaattcccttcgtgaagatccaacaacttggaggtgggcagagcaattgtatgaa
aatattaggaagaatcgttttcagtcagatcgaatgtatgatattgtgtggtccacatca
tcatcaggatatgtgtcgtttgtagctcctctccatgtttcttctcaatctagctccgct
atcgattggacggcgtacatggaacgccttgttattgaactcagcaaacctgatcttaga
gaaaatgctattcgtgtgctctccaagttatttcatgaacttgcacctttgttgtggaat
tctgttggtactattgcagtacttttacaggaaataatttcaatatatcctaatctttca
ccaccaactctttctccaacacaatcaactcgagtgtgcaatgttctttgtgtggcatct
caccccaatacaaggatgtcactcatcatagcttgcatacctcagtatgtgtaccctttc
cttgaaacgacaaatatcttaccacagtttgactatttgagggttgcgagtcttggagtc
atcggtgccttagtgaaggctaatagcaaagaagttatactttttcttctttcaactgag
atcattccattatgcttgcgcagcatggaaattggcaaagaattgtcaaaaaatgttgcg
acattcattcttcaaaaaattttgctggatgatgatggtttagcttatgtatgtgcaaca
acagaccgattttttgctgtacgtcgaattttggacatggtgttggaaagtcatgagagg
caaccttcaactcagcttttgaagcttataattccatgttattctcgtttgtctcaaaat
cgcagggctggaattgcattaacaagctctcttccggttgtgtttgcaaaccccgctttc
attaactcccttcgtgaagatccaacaacttggaggtggatggagcaattgtatgaaaat
attaggaagaatcatgttcagtcagcacgaactgaagtacaaatggatgatattgtggat
aaattatgtgtttga
DBGET
integrated database retrieval system
