Trifolium pratense (red clover): 123920486
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Entry
123920486 CDS
T08949
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123920486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123920486
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123920486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
123920486
NCBI-ProteinID:
XP_045828706
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All DBs
Position
LG4:81989..86579
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AA seq
304 aa
AA seq
DB search
MDNLPSQSLSMTNGVSFVAPLCVSAQSSSTIDWTAYMERLVIELSNPNLRENAICVLSKR
KELFHELAPLLWNSFGTIAVLLQEIISIYRNLSPPTLSPAQSIRVCNVLALLQCLASHPN
TRMSLITACIPHYVYPFLEMINTLPQFHYLRVASLGVIGALVKDSSKEVILFLLSTEIIP
LCLRSMEIGNELSKNVATFILQKILLDDDGLAYVCATTDRFLAVRRILDMVLESHERQPS
TQLLKLIIPCYSRLSQNRRAGIALTSSLPGVFTNPAFINSLREDPTTWRWMEQLYENIRI
NNCK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggacaatttgccttctcaatcgctctcaatgacgaacggtgtatcgtttgtagctcct
ctctgtgtttctgcccaatctagctccactatcgattggacggcgtacatggaacgcctt
gttattgaactcagcaatcccaatctcagagaaaatgctatttgtgtgctctccaagcgg
aaagagttatttcatgaacttgcacctttattgtggaattcttttggtactatcgcagta
cttttgcaggaaataatttcaatatatcgtaatctttcaccaccaactctttctcccgct
caatcaattcgagtgtgcaatgttcttgcactacttcagtgtctcgcatctcaccctaat
acaagaatgtcactcatcactgcttgcatacctcactatgtgtaccctttccttgaaatg
ataaataccttaccacagtttcactatttgagggttgcgagtctcggagtcattggtgcc
ttggtgaaggatagtagcaaagaagttatactttttcttctttcaactgagatcattcca
ttatgcttgcgcagcatggaaattggcaacgaattgtcaaaaaatgttgcgactttcatt
cttcaaaagattttgctggatgatgatggtttagcttatgtttgtgctacaacagaccgt
tttcttgccgtacgtcgaattctagacatggtgttggaaagtcatgagagacaaccttca
actcagcttttgaagcttataattccatgttattctcgtttgtctcaaaatcgcagggct
ggaattgcattaacaagctctcttccgggtgtgtttacaaacccggctttcattaattcc
cttcgtgaagatccaactacttggaggtggatggagcaattgtatgaaaatattaggatc
aacaattgcaaatga
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