Trifolium pratense (red clover): 123920624
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Entry
123920624 CDS
T08949
Name
(RefSeq) protein argonaute 5 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123920624
03036 Chromosome and associated proteins [BR:
tpra03036
]
123920624
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123920624
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123920624
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123920624
microRNA pathway
RISC loading complex
123920624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
123920624
NCBI-ProteinID:
XP_045828870
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All DBs
Position
LG4:complement(16355386..16361889)
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AA seq
1019 aa
AA seq
DB search
MSRRGGGNPSDNRRNQPQPSPATSRLNAAGTGRGGGGRGSRGGHTVPSSSSVHVPPPAPI
NTAASSVVAPVVHPVHPSVSAPVTGSSSAPTVPSPAPATVSAEALSTEVQQKLTLQSASA
PASQKAIRFPNRPGYGQLGKKVQVRANHFQMQVAERDLHHYDVSIAPEIPSKKVSRDIIN
QLVKMHRESLLENRIPAYDGRKSLFTAGPLPFTSKVFVVNLVDEDRGSSSGSDRKKRERE
FKVTIRFASKPDIVHLNQFLRRLQPDCPYETIQVLDVALRATPAEMYTVAGRSFFSPNLG
APGPLGGGTEFWRGFYQSLRPTQMGLSLNIDVSSRAFYEPVLVTEFVSKNFKLNFSRQLS
DQDRLKIRRALKGLKVRLSHGAGMRSCKVTGLSKEPLKDLTFTLEDKVTKKKVLDYFHEK
YNIELKFPLLPAIQSGSDARPMYFPMELCRIESGQRYSKRLNEEQVTNLLRATCQRPHQR
EQDIKNIVKQHRFNSDKVVKEFGINVREDLALVDARVLTPPTLKYHGTGGESKLDPRMGQ
WNMISKKMVDGGKVQFWGCLCFAKMDPTMFCQELVTMCQAKGLVFNRDPVVPLSPGNPNQ
IERELENFNKKCKAILESKQQRLQLLIIIMPDFKGVRTYDKIKRVCETELGIVSQCCQPR
QAQKLNKQYLENLALKINVKVGGRNTVLNDAFERRIPLVTDRPTIIFGADVTHPQPGEDS
SPSIAAVVASMDWPWVTKYRGVYSAQSHREEIIQDLYKTVVHPQRGVVPSGMIRELIVSF
YKATGRKPERIIFYRDGVSEGQFSQVLLYEVDAIRKACASIENGYLPPITFVVVQKRHHT
RLFPVRREETDKSGNIMPGFFNLFVICCYLHTAGIYYHAILSLFSDCVLQNFVIGTVVDT
NICHPREFDFYLNSHAGIQGTSRPAHYHVLFDENRFSADHLQSLTNNLCYTYARCTRSVS
IVPPAYYAHLLAFRTRYYLSDAADTSDSDSANGGTRNATNVVAALPSIIESVKDNMFYV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgcggtggtggaaacccttccgataaccgtcgtaaccaaccacaaccatct
ccggctacatctcgtctcaatgctgccggaacaggccgtggtggtggtggtcgtggatct
cgcggtggacataccgttccatcttcttcatcggtccacgtacctcctccggcaccgatc
aacaccgctgcttcatctgttgtagcgccggtcgttcatcctgttcatccatccgtttct
gctcccgttaccggctctagttcggctccgactgtaccttctccggctccggcgacggtt
tccgccgaagcgctgtctactgaagttcaacagaagcttactctgcaatcggcttccgct
ccggcgtctcagaaggcgatcaggttccctaatcgtcctggttatggtcagttagggaaa
aaagtgcaagttcgtgctaatcattttcagatgcaagttgctgagagggatctgcatcac
tacgatgtgtcgattgcgccggagattccttcaaaaaaagtgtccagagacattatcaat
cagttggttaagatgcatcgggagtcactgttagagaatcgcattcctgcttatgatggt
aggaagagcctgtttactgctggaccattaccgtttacttctaaggtttttgtggttaac
ttggttgacgaggatcgaggatcctcttctggttctgataggaaaaagcgtgaacgcgag
tttaaggttacgattcggtttgcttcaaagccagacatcgtccatcttaatcagtttctc
cgtcgtttgcagccggattgtccttatgaaaccatacaagttcttgatgttgctttgcgg
gcgactccagctgaaatgtacactgttgcagggaggtcatttttctcacccaatttgggg
gcacctgggcctcttggcggcgggacagaattttggagaggcttttatcaaagccttagg
ccaacacaaatggggctctccctcaacattgatgtatcttcgagggccttctatgaaccg
gttcttgtgactgaatttgtttctaaaaattttaaattgaatttttcaaggcagctgtct
gatcaagaccgtctcaagatcagaagagccttgaaaggtcttaaggtacggctatctcat
ggggctggaatgaggagttgtaaggtgactggtctctcaaaagagccactcaaagaccta
acgttcacacttgaggataaagtaactaagaaaaaagttctggattatttccatgagaaa
tacaatattgagttgaagtttccacttcttcctgctatccaatctggaagtgacgcaaga
cctatgtattttccaatggagctttgccgaattgagtctggacagaggtactccaaaaga
ttgaatgaagagcaagtaaccaatcttttaagggctacctgccagcgtcctcatcagaga
gaacaagatattaaaaatatcgtaaagcagcaccgcttcaactcagacaaggttgtgaag
gagtttggaatcaatgtaagagaggatcttgctctggttgatgcccgtgttttgacaccc
ccaacgctcaaatatcatggaactggtggagaatcaaaacttgaccctcggatgggtcag
tggaatatgatttctaagaaaatggttgatggtggcaaggttcaattttggggttgcctt
tgctttgcaaaaatggacccaactatgttttgccaagagttggttactatgtgtcaagcc
aagggactggttttcaaccgagatcctgtggtacctctttccccaggcaatcctaatcaa
attgagagagagcttgagaattttaacaagaagtgcaaggcaatacttgaaagcaaacag
cagaggcttcaattgctgataataattatgcctgatttcaagggtgtgagaacttatgat
aaaataaagcgtgtctgtgaaactgaactgggaattgtttctcaatgttgtcagccaagg
caagcgcaaaagttgaataagcagtatcttgaaaatttggctttgaagattaatgtcaag
gttggtggtcgtaacactgtgctgaatgatgcatttgagagaagaattccacttgtaact
gatagaccaacgataatatttggtgcggatgtaacacatccacagccaggggaagactca
agtccttctatagctgcagtggtggcatccatggattggccttgggtcaccaagtacagg
ggagtttattctgcccagtctcatagggaagaaattattcaggatctgtataaaactgta
gtgcatcctcaaaggggggttgtacctagtggaatgataagggagctaattgtgtctttc
tataaggcaactgggcgtaagcctgagaggattatattttacagagatggagtaagtgaa
gggcagtttagtcaggttttgctttatgaggtggatgcaatccgaaaggcttgtgcctcg
atagaaaatgggtatctacctccaattacttttgtggtggtccaaaagagacatcatacc
cgcctctttcctgtaagaagagaagagacagacaaaagtggaaatataatgccaggtttt
ttcaatttatttgttatttgttgttatctgcacacagctggtatctattatcatgccata
ttatctcttttttctgattgtgttcttcaaaattttgttataggaactgtggtagacacc
aacatttgccaccccagagaatttgatttttatctcaacagccatgctgggattcagggc
actagtcgaccagctcattatcatgtgttgtttgatgaaaatcgcttcagtgcagatcac
ttacagagtttgaccaataacttgtgttacacttatgctaggtgtactcgatcagtgtca
atagttcctcctgcttattatgcacacttgttagctttccgaactcgctactacctcagt
gacgctgctgacacttctgattctgattctgcaaatggcggtactaggaatgccaccaat
gtggtggcggcacttccctccatcattgaaagcgtcaaagataacatgttttatgtttaa
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integrated database retrieval system
