Trifolium pratense (red clover): 123920655
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Entry
123920655 CDS
T08949
Name
(RefSeq) ABC transporter B family member 25, mitochondrial-like isoform X1
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123920655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123920655
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
123920655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_15
AAA_29
Zeta_toxin
AAA_21
AAA_16
RsgA_GTPase
DUF87
nSTAND3
MMR_HSR1
AAA_18
FtsK_SpoIIIE
AAA_24
AAA_28
AAA_23
Motif
Other DBs
NCBI-GeneID:
123920655
NCBI-ProteinID:
XP_045828905
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All DBs
Position
LG4:complement(34369482..34381064)
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AA seq
739 aa
AA seq
DB search
MLAAASRHARPTAGSGNRIGSLLTASGITTGYSIPTTNGYRYGYNNGISYSNYHHKTCPS
LLFSIKGFLSESSSSSSSSPSGRVTNSFISLPNLKVDGKALFSTSAKTDDGSQKNQKSST
TVAKSPPGGGQMADIKILKSLAGYIWMKNNLEFQFRVVAALFLLVGAKVVNVQVPFLFKL
AVDWLNTATGNAAAVASNPTVMALFATPVSVLIIYGIARSGASAFNELRTALFSKVALRT
IRLVSRKVFSHLHDLDLQYHLSRETGGLSRIIDRGSRAINFILSAMVFNVVPTVLEISMV
SGILAYKFGAPFAWITSLSVAAYVVFTLSITQWRTKFRKAMNKADNDASTRQIDSLINYE
TVKYFNNEGYETDHYDKYLKRYEDAALKTQHSLALLNFGQNAIFSAALSTAMVLCSQGIM
DGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLIDMKSMFQLLEEKADIRDKENAK
PLRFNGGRIQFENVHFSYLTERKILDGISLLVPAGKSVAIVGTSGSGKSTILRMLFRFFD
PHSGSIKIDDQDIRDVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSSTEEEVYEAAR
KAAIHDTIMSFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTT
EAEILSALKSLSTNRTSIFIAHRLTTAMQCDEIIVLENGKVVEHGPHEVLIANAGRYAQL
WGQQNNTIDAIDTAIKLGA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgctgcttccaggcacgccagacctacagctggcagcggcaatcgtatcggg
tcacttctaactgcttccggcatcaccaccggttactcaattcccaccactaacggttac
cgttacggttacaataacggaatcagttacagtaactatcaccacaaaacatgcccaagc
ttacttttctctatcaaaggctttctctctgaatcatcatcatcatcatcatcatcacca
tctggcagagtaaccaattcattcatatcattacctaatttgaaggtagatggaaaagca
ttgttttcaacttcagctaaaactgatgatggaagtcagaagaaccaaaaaagttctact
actgttgctaaatcgcctccaggtggtgggcaaatggcggatataaagatcctaaaatca
cttgctggttacatttggatgaaaaataatctcgaatttcagtttcgggttgttgctgca
ttgtttttacttgttggagctaaggttgtgaatgttcaggtccctttcttattcaagctt
gcagttgattggttaaatactgccacgggcaatgctgctgctgttgcttcaaatcctact
gtgatggccctttttgctacccccgtgtcagtgttgattatatatgggattgcacgttct
ggagcttctgctttcaatgaactgcggactgctttgttttccaaggtagcattgcgaaca
attcgtttagtttcaaggaaggtcttttcacatttgcatgaccttgaccttcaatatcat
ctaagtcgagaaactggtggattaagtcgaataattgatcgtggtagccgtgcaataaat
ttcattctctccgctatggtgttcaatgtagtacccactgtattagagatatctatggta
tcaggtatactggcctacaaatttggagcaccttttgcatggattacttccctgtcagtt
gctgcttatgttgttttcacactttctatcacacagtggaggactaaattcaggaaagcc
atgaacaaggctgataatgacgctagtactaggcaaattgattcacttattaattatgag
accgtcaaatatttcaataatgaaggttatgaaaccgatcattatgacaagtacctaaag
aggtatgaggatgctgctctgaaaacccaacacagtcttgctttgttgaactttggtcaa
aatgctatatttagtgctgctctttctacagcaatggttctatgttctcaaggaataatg
gatggcacaatgaccgttggtgatttggtgatggtaaatgggctcctcttccaattgtct
cttccactcaatttccttggcagtgtttatcgtgaaactatacaaagtctaattgacatg
aaatccatgttccaattacttgaggaaaaagcagacattagggataaagaaaatgcaaag
cctctaagatttaatggtgggaggatccaatttgagaatgtacattttagttacctcaca
gagagaaagatactagatggaatatcactacttgtgccagctggtaaaagtgttgcaatt
gttgggactagtggaagtggaaaatcaaccattctcagaatgctattcagattttttgat
ccccattctggaagtataaagatagatgatcaagatattcgggacgtaacccttgagagt
ttacggaagtctattggtgttgttccacaagatactgtacttttcaatgatacgatattt
cataacattcactatggtcggctttcatcaacagaagaggaggtctatgaagctgcccgg
aaagcagcaatccatgacactatcatgagttttccagagaaatactccactgttgtagga
gagcgaggcctaaagttaagtggtggtgagaagcaacgtgttgcccttgctcgggcattc
ttaaaagcacctgcaatactgttgtgtgatgaagctacaagtgctctagacagtacaaca
gaagcagagattttaagtgcattgaagtcactatcaactaatcgaacttccatattcatt
gctcacaggctcaccactgcaatgcagtgtgatgagatcattgttttggaaaatggaaag
gtggttgagcatggaccacatgaagttctcatagcaaatgcaggaagatatgcacaactt
tggggacagcaaaataacactattgatgcaattgacaccgccatcaaattgggagcataa
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