Trifolium pratense (red clover): 123920673
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Entry
123920673 CDS
T08949
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00730
Thiamine metabolism
tpra00900
Terpenoid backbone biosynthesis
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
123920673
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
123920673
Enzymes [BR:
tpra01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
123920673
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-GeneID:
123920673
NCBI-ProteinID:
XP_045828920
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All DBs
Position
LG4:complement(40687649..40691937)
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AA seq
722 aa
AA seq
DB search
MDLCAFPCPAFVTPSDNSPRRTLLLSSHSQSQWGLHLLSHSQHKLNNKKCTRTRTRTRVY
ASLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGHLGS
SLGVVELTIALHYVFNSPQDRILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSE
SEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGYLDS
DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPM
HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSTNSTGPVLI
HVITEKGRGYPYAEKAADKYHGVTKFDPPTGKQFKVTAPTQSYTTIFAEALIAEAKADKD
IIAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQR
GYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVAFMACLPNMVVMAPSDEAELC
HMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEVGKGRILIEGERVALLGYGTAV
QNCLAAASLVERHGLRLTVADARFCKPLDRSLIRSLAKSHDVLITVEEGSIGGFGSHVAQ
FMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLSMAGLTPSHIAATVFNILGQTREALEV
MS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatctctgtgcatttccatgtcctgcttttgtaacaccttctgataattctcctaga
agaacacttcttctatcttctcactctcaatctcaatggggtcttcatttactctctcac
tcccaacacaaactcaacaacaaaaagtgtactagaactagaactagaaccagagtttat
gcttcactttctgaaatgggtgagtattattctcaaagacctccaactccattacttgac
accattaactatccaattcatatgaaaaatctctctaccaaggagctgaaacaacttgcg
gatgaactacgttctgatgttattttcagtgtttcaagaactgggggtcatttaggttca
agtcttggtgttgttgaacttactattgctcttcactatgtctttaattcacctcaagat
aggattttgtgggatgttggtcatcagtcttaccctcataaaatacttactggtagaagg
gataagatgcataccatgagacagactaatggattatctggatttacaaaacgttctgag
agtgaatatgattgttttggtactggtcatagctcaacaactatttcagctggacttgga
atggcggttgggagagatctaaagggaagaaagaatgatgtagttgcagttattggtgat
ggtgctatgacagcaggtcaagcttatgaagccatgaacaatgctggatatcttgattcc
gacatgattgttattttaaatgacaacaaacaggtttcgttaccaactgctactcttgat
ggacctataccacctgtaggagctttgagtagtgcactcagtaggttacaatcaaataaa
cctcttagagaattgcgagaggttgccaagggagtgactaaacgaattggaggtcctatg
catgaattggctgcgaaagttgatgagtatgctcgtggtatgatcagtggttctggatcg
acactttttgaagaacttgggctctactatattggtcctgttgatggtcataacattgat
gatctagttgccattctcaaagaagtcaaaagtactaatagtactggtcctgtattgatc
catgttatcactgaaaagggccgtggatatccatacgcggagaaagcagctgacaagtac
cacggcgttaccaagtttgatccaccaactggaaaacaattcaaagtcacggctcccaca
cagtcttacacaacaatctttgcggaggctttgattgcagaagccaaagctgacaaagat
attatcgcaatccatgctgcgatgggaggtggaactggcatgaatctcttccatcgccga
ttcccaacaagatgctttgacgtggggatagcagaacagcatgccgttacgtttgctgca
ggtctggcttgtgaaggccttaagcctttctgtgcaatttattcatcattcttgcagagg
ggctatgatcaggtggtacatgatgttgatttgcagaagctgcctgtaagatttgcaatg
gacagagctggattagttggatcagatggtcctacgcattctggttcctttgacgtcgcc
tttatggcatgcctccccaacatggtggtgatggctccttcagatgaagctgagctttgc
cacatggttgccaccgcagcagccatcgacgatcgacctagttgtttccgatacccgagg
ggaaatggcattggtgttgaactgccaactgagtacaaaggcattcctcttgaggttggt
aaaggtaggatacttattgaaggggaaagagttgccctcttgggctacggaacagccgtt
cagaactgtttggctgcagcttccttagtggaacgtcatggcttgcgcttaaccgttgcc
gatgcacgtttctgcaagccattggatcgatccttgattcgcagcctggcaaaatcacac
gatgttctgatcaccgtagaagaaggatccattggaggatttggctctcatgttgctcag
ttcatggcacttgatggccttttagatggaaatttgaagtggaggccggtggttcttccc
gaccgttatattgaccatggatcacctgctgaccaattgtctatggctggtcttacaccc
tctcacatagcagcaacagtgtttaacatacttgggcagacaagagaggcattagaggtc
atgtcataa
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