Trifolium pratense (red clover): 123920784
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Entry
123920784 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123920784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123920784
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123920784
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123920784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Sina_RING
Sina_ZnF
Retrotrans_gag
Rad60-SLD_2
Ubiquitin_2
Dsc3_N
Plexin_RBD
Motif
Other DBs
NCBI-GeneID:
123920784
NCBI-ProteinID:
XP_045829057
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All DBs
Position
LG4:36920009..36922550
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AA seq
423 aa
AA seq
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MMISLYDGKEDAYWWVLCTEKIFKEQGTPEAMKLWKAVTALRGPALQWWLWRSLRQPPTT
WNDFTTVFIWRFKPEWRDILPVDDDEEEEPKLDLSMLSVSNGSNNNNSSVSVLISDPQVF
DCYNCSQTLTVPLFQCDNSHIVCSTCCPKLMNKCGKCSLGISSKRCKAIENILQSMGMPC
PNEIHGCKESISYLGNRKHEECIHEPCCCPLLGCNFVASSEVLSTHFSHKHDGSQIEFSY
GHSFIVSLKSNDETIVLQEENDGKLFILNNSTMLLGNAVNICHIGPNSSESEYSYDILAR
SQTCKLKLHSSAKNVQRVTLATLSSEFLVIPSGSCEPLKLEICITPLMQIYVKTLTGTII
SMRVKTSDTIVDVKKKILDKGGYEVHDQRLIFAGKQLEDTRTVANYNIQDKSTIDLVIRL
TGD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatccctgtatgatgggaaagaagatgcttattggtgggttctttgcaccgaa
aaaatattcaaggagcaagggacaccagaggctatgaaattgtggaaagctgttacggca
ttgagaggtcctgctctacaatggtggctctggcggtctcttcgtcagccgccgacaact
tggaatgacttcaccacggtttttatttggcgttttaaacctgaatggagagatattttg
ccggtagatgacgacgaggaggaggagccaaaattggacttgtctatgttgtctgtgtcc
aatggtagtaacaacaacaatagctccgtttctgtgcttatttccgacccgcaagtgttc
gattgctacaattgttctcaaaccttaactgttccactctttcagtgtgataatagtcat
attgtttgctctacctgctgtcctaaacttatgaacaagtgtggcaagtgctcattgggc
attagctcaaaacgttgtaaagccattgagaatatattgcaatcaatgggaatgccatgt
cccaatgaaatacatggttgcaaggagagtataagttaccttggaaataggaagcatgag
gaatgcatccatgagccatgttgctgcccccttttaggttgtaactttgttgcatcttcg
gaagtgttgtccacccatttcagccataaacacgatggttctcaaatagaattttcttat
ggtcactccttcattgtctctttaaagtctaatgatgaaaccattgttcttcaagaggaa
aatgatggcaaactatttattctcaataatagtactatgcttttgggaaatgcagtcaat
atttgccatattggtcctaattcttctgaatccgagtatagttatgatatattggcgagg
tctcagacatgcaaactgaaattacattcttctgcaaagaatgttcaacgtgttacttta
gcaactctttcatcggagttccttgtcattccatctggttcttgtgaacctctcaagcta
gaaatttgcataacccccttgatgcaaatctatgtaaagaccctgactggaacaataatc
tccatgagggttaagacttcagacacgatagtcgatgtgaagaagaagattcttgacaag
gggggctatgaagtgcacgatcaacgtctgatctttgccggtaagcaactagaagacaca
cggaccgttgccaattacaacattcaagacaagtcaaccatcgaccttgtaatccgcctc
actggggactag
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