Trifolium pratense (red clover): 123920939
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Entry
123920939 CDS
T08949
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123920939
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123920939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_EndoS
LRR_8
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
123920939
NCBI-ProteinID:
XP_045829246
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All DBs
Position
LG4:5965789..5971167
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AA seq
676 aa
AA seq
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MKKQKFIVEQQNSNNNNNLFESLSEELIFTILDFLEPNNQSKQTKKSFSLCCKWFHALES
KHRRALRPLRAEHIPTILARYPSIQNIDLTLCSRVNDTSLTLIAGAYKNTLRRIDLSRSR
FFTWNGILNVAVNCVNLVELDLSNATELRDAAMVGVARAVNLEKLWLNRCKLVTDMGIGC
IAVGCRKLKLISLKWCVGVADLGVDLIAIKCKQLSSMDLSYLPITEKCLSSIFKLQHLED
LVLEGCFGVGDDSLNNLVVNQGCKTLKKLDISGCQNISHIGLSKLTSISGCVEQLVLADG
SPVTLAFADSLSKLSMLQSITLDGCIITSDGLKAIGNLCISLKELSLSKCSGVTDEALSF
LVSKHRDLRKLDITCCRKITDVSIASIANSCRSLTSLKMESCTLVSSEAYILIGQKCHYL
EELDLTDNEIDDEGLESMSRCSRLSSLKLGICLNITDRGVSYVGMCCSKIKELDLYRCTG
VTDLGISAIASGCPDLEMINTAYCTSITDRALFCLSKCANLQTLEIRGCLLVTSIGLASI
SMNCKQLSRLDIKKCYNIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLAGISCLQNF
TLLHLQGLSPQGLAAALLACGGLTKAKLHVKLRSLLPELLIRHIEARGCVFEWRDKVFQA
ELDPKCWKLQLEDLIQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaaaagttcatagtagaacaacaaaactcaaacaacaacaacaacctattt
gaatcactctcagaggaactcattttcacaatcctagatttcctcgaaccaaataaccaa
tcaaaacaaaccaaaaaatcattctctttatgttgtaaatggttccacgcgcttgaatca
aaacacagacgcgctctccgtcctttacgcgccgaacatataccaacaattctcgcgcgt
tatccatctatccaaaacatcgatctaaccttgtgttcgcgcgtgaacgacacgtcctta
actctgatcgccggagcgtataaaaatacgctcaggcgtatcgatttatcgaggtcgagg
ttttttacgtggaatggaatattgaatgtggcagtgaattgtgtgaatttggttgagctt
gatttgtcgaacgcgacggagttgagagatgcagctatggttggtgttgcacgcgctgtg
aatttggagaaactttggttgaataggtgtaagttggttactgatatgggaattggatgt
attgctgttggttgtaggaaattgaagttgattagtttgaaatggtgtgttggtgttgct
gatttaggtgttgatttaattgctattaagtgtaaacaactttcttctatggatctctct
tatttgcctatcacagagaaatgtctctcctcgatcttcaaattgcaacatctcgaagat
ttggtccttgaaggatgctttggcgttggggacgacagcctcaacaatttagtcgtcaac
caaggatgcaagacattaaagaaacttgatatctcaggctgtcaaaacataagtcatatc
ggtctatcaaagctaacaagcatttctggatgtgtcgaacaacttgtattagcagatggt
tctccggtgactcttgcttttgctgatagtttgagtaaactttcgatgttgcaatcgatc
acattagacggctgcattattacctctgatggattgaaagccattggaaatttgtgcatt
tcacttaaggaactcagtttaagcaaatgttccggagtgacggatgaagctctttctttc
cttgtgtcaaaacacagagatttaaggaaacttgacatcacatgctgccgcaaaataacc
gatgtttcaattgctagcattgcgaattcgtgcagaagtctcacttctctcaaaatggag
tcgtgtacgctagtttcatcagaagcgtatatattgattggacagaaatgccattatctt
gaggaacttgatctcaccgataatgaaattgatgatgaaggccttgaatccatgtctcgt
tgttcgaggctctccagccttaaactaggaatctgcctgaacataactgatagaggagtt
tcctatgttggcatgtgttgctcaaagataaaggagcttgatctatacaggtgcacagga
gtaacagatttgggaatctcagcaattgcttctggttgccctgacctagagatgataaat
accgcatattgcactagcattaccgatagggcgttattctgcttatcaaaatgtgcaaat
ttgcagacactcgaaattcgtggttgtcttcttgttacatccataggtttggcatctatt
tcaatgaattgcaaacaactaagccgcctagacataaaaaagtgttacaatattgatgat
agtggtatgattccactagctcatttctcccaaaatctaagacagataaacttgtcgtat
agctcagttacagatgtagggcttctttcacttgccggtatcagttgccttcaaaacttt
accctacttcacctgcaaggcttgtctccacaaggactagcggcagcgttattggcatgt
ggagggctaacaaaagcaaagcttcatgttaaactaagatctcttttacccgagctgctc
atcagacatatagaagcacgagggtgcgtgtttgaatggagagataaagtgtttcaggct
gaattggaccccaagtgttggaaattacagttagaagatctgatacaatag
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