Trifolium pratense (red clover): 123921187
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Entry
123921187 CDS
T08949
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123921187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123921187
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123921187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
123921187
NCBI-ProteinID:
XP_045829573
LinkDB
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Position
LG4:3700868..3705603
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AA seq
493 aa
AA seq
DB search
MQSDNGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTSGRARGFGFVVFIDPAVA
EIVIKEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIQGSPGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKR
AVPKELSPGPTRSPLSGYNYGLSRVNSFLNGFSQGYSPSTVGGYGLRMDGRFSPVASGRN
AFAPFGSAYGMGMNFEPGLSPGFGGNANFNGNLSYGRGLNPYFIGSSNRFGSPVGYESGN
GGNNSFFSSVTRNLWGNGSLNYGTNSANSSAYIGSGSGNVGGNAFGNTGVNWSSSPISGH
GGGNNVSQGSGNLGYGGGNNGYGLGTEGYGRSSGSTLAPTSSYSASNGGGVDGAFADFYN
NNSVYGDTTWRSSNSERDGSGPFGYGLGGAASDVSAKTSPGYVGGYTVNKRQPNRGKSDI
SYSYLSQLLSQSA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagataatggcaagttatttattggtggaatatcgtgggacacaaatgaagaa
cgactcagggagtattttagtacttatggtgaggttaaggaagcagtgataatgaaggat
cggacatctggtagagctcgtggatttggttttgttgttttcatcgacccagctgttgca
gaaattgtcatcaaagagaagcacaacatcgatggaaggatggttgaggcgaagaaagcc
gttcctcgtgatgatcagaatgtattgagtagaaccagtggcagcatccaaggttctcct
ggtccaggtcgcacaagaaagatatttgttggaggtttagcttctacagtgacagagagt
gatttcaagaagtactttgatcagtttgggactataacagatgttgtagtaatgtatgat
cacaacactcagaggccacggggctttggatttatcacttatgattcagaagaggctgtt
gaccaggtcttacttaagacgtttcatgaattgaacggtaaaatggttgaggtcaagcga
gcagttcctaaggagttatcgccaggacctacccgctctcctctcagcggatacaactat
ggtctgagtagggtcaatagtttcttgaatggtttcagtcaggggtacagtccaagtact
gttggaggctatggacttcggatggatggtaggttcagtccggttgctagtggccgaaat
gcatttgcgccatttggttctgcttatggaatgggtatgaatttcgagcctggtttgagt
cctggatttggaggtaatgcaaatttcaatggaaatcttagctatggacggggcttaaat
ccgtacttcatcggcagctccaataggtttggcagtcctgttggatatgaaagtggtaat
ggaggaaacaattcgttcttcagttctgtgactcgaaatttgtgggggaatggaagcctt
aactatggaacaaattctgcaaattccagtgcatacattggatcagggagtgggaatgtt
ggaggaaatgcattcggcaatactggagttaactggagttcttccccgatttctggacac
ggtggagggaacaatgtgtcacagggtagtggcaaccttggatatggaggtggcaacaac
ggttatggattagggactgaagggtatggaagaagcagtggctccactcttgcaccaaca
tcttcatactctgcatcaaatggtggtggtgttgatggtgcttttgctgatttttacaac
aataattcggtctatggggacaccacttggcgatcttcgaattctgagagagatggatct
ggcccctttggttacggacttggtggtgcagcttcagatgtttctgccaagacttctcct
ggttatgttggtggttatactgttaataaaaggcagccaaataggggtaagagcgacatt
tcctactcatacttatctcaacttctcagtcaatcagcataa
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