Trifolium pratense (red clover): 123921199
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Entry
123921199 CDS
T08949
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123921199
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123921199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
123921199
NCBI-ProteinID:
XP_045829592
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All DBs
Position
LG4:15039126..15046944
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AA seq
1031 aa
AA seq
DB search
MIAEKPLWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKCVSTTDSTNDEPSQRLL
ATLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGSGTTEFGSGEAPDIENWKVAM
TLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMSNGICTTVLRGHSSLVKGVAWDPIG
SFIASQSDDKTVIIWKTSDWSLAHKTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP
RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFKKNLSSAEEVKSVPVGWSNGASKTG
NKEPQPYNVIAIGSQDRTITVWTTGSPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG
SVGIFHFDAKELGQRLSDAELDELKRSRYGDVRGRQANLAESPAQLLLEAAATKQTPSKK
MVSSQQNQTIAKTYVDTRVGAKNVEPQVDHNKKGGGPVGDALNKGNIALSTSAAARISSP
VKQREYRRPDGRKRIIPEAVGVPVQQKNISSAVQTQALDFPLVSSDHQRGTNGIVSKDDS
VRASTSGGALGRNSDFKERSGVTARATISESLVIEKVSASSDGDGIINVEQLGNSTATGS
HATLSIRIFDKKGGDDTLPICLEARLREHTVNDTVGMGNASMMRETEIACTRGPQTLWSD
RISGKVTVLAGNVNFLAVGCEDGCLQIYTKCGRRAMPTMMMGSAAIFVDCDESWKLLLVT
RKGSLYLWDLFNRTCLLQDSLASLVASSPSSSAKGTIKVISAKLSKSGSPLVVLATRHAF
VFDMNLKCWLRVADDCFPASNFASSWSLGSIQSGELAALQVDVKKYLARKPGWTRMTDDG
VQTRAHLEAQLASSLALGSSNEYRQCLLSYVRFLAREADESRLREVCESFLGPPTGMAED
ASSNKSLAWDPVVLGMKKHKLLIEDILPAMASNRKVQRLLNEFMDLVSEYEIADANNHDQ
RNPLLLKTSSPVTNLIESGPLETYVQDTPEDAIYSKDIIDQVEKSLANFPPVLANEASAH
DQIVQDTPDQE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacctctttgggttagacatgagggcatgcaaattttctccattgat
gttcagccaggtgggcttaggtttgctactggtggtggtgatcacaaggttcgtatatgg
aatatgaagtgtgtttctactactgactcaacaaatgacgagccttctcagaggcttctt
gcaaccctgcgggatcattttgggtctgttaactgtgtaaggtgggctaagcatggaagg
tatgttgcatctgggtcagatgatcaggtgatattaattcatgagaggaagcctggttca
ggtactacagaattcggtagtggagaagcaccggatattgaaaactggaaagttgcaatg
acattgagagggcacactgccgacgtggtggatcttaattggtcacctgatgattccaca
ttggctagtgggagtttggacaacaccattcatatatggaatatgagtaatggcatttgc
acaactgttctaaggggccactctagccttgttaagggggttgcttgggatcctatagga
tcttttatagcaagtcaatctgatgataaaaccgtcattatctggaaaactagtgattgg
agtcttgctcacaagacagatggtcattgggctaaatcacttggatcaaccttcttcagg
cggcttggttggtctccatgtggtcattttatcaccacaactcacggtttccagaagcca
aggcattctgcccctgtgcttgagagaggggaatgggctgcaacatttgacttcttagga
cacaatgctccaattattgtggtcaagttcaaccattcgatgttcaaaaagaatttgtct
agtgctgaggaagtcaagtctgtgcctgttgggtggtccaatggtgcttccaagacagga
aacaaagagccacagccatacaatgttattgcaattggaagtcaggatcgaactataacc
gtatggactactggaagtcctcgtcctctttttgtggccaagcatttttttactcaaagc
gttgtggatttatcctggagccctgatgggtattcactttttgcatgttccttggacgga
tctgttggtatatttcattttgatgcgaaagaactaggtcagagacttagtgatgccgag
ctagatgagttgaagagaagtcgctatggtgatgtgagaggccgtcaagcaaacttagct
gagagtccagcacagttattgcttgaagcagctgctaccaagcaaacaccaagcaaaaag
atggtttctagtcagcaaaaccagacaattgcaaaaacttatgttgatacacgtgttggt
gcaaagaatgtggagcctcaagttgatcataataagaagggcggaggtcctgttggtgat
gcgttaaacaaagggaatatagccctgtcaacctctgcggctgcacgaatttctagcccc
gtcaagcaaagggagtatagacgtcctgatggaaggaaaagaattattcctgaagcagtt
ggagtgccggttcagcaaaaaaacatttctagtgcggttcaaacccaagcacttgacttc
cctctagtgtcttctgatcaccaaaggggtaccaatggaattgtatctaaagacgatagt
gtaagagcaagcacctctggtggagcacttggcaggaattcagattttaaagaacgttca
ggggtaaccgccagggctacaatttctgagagcctagtgattgagaaggtttcggcttct
tctgacggagatggaatcatcaatgttgagcagttgggaaattcgacagctactggttct
catgccactctttccattaggatatttgacaagaaaggtggggatgatactttgcctatt
tgcttggaagcacgactgagagaacatactgtgaatgacactgtaggaatgggaaatgca
tccatgatgagagaaacagaaattgcttgcacaagggggcctcaaacactttggtctgat
agaatatcaggaaaagtcactgttttagctggaaatgtaaattttttggcggttggttgc
gaggatggttgtctacagatttacacaaagtgtgggagacgagcaatgcctaccatgatg
atgggatctgctgcaatatttgtagactgtgatgaaagctggaaactgttgctggtgaca
agaaaaggatctctttatttgtgggatttattcaaccgaacctgtctccttcaagactcg
ttggcttctcttgttgcgtcaagtcctagctcatctgctaaaggaaccattaaagttata
tctgcaaagctatcaaaatctggttctcctctagttgttttggccactcgtcatgctttc
gtatttgacatgaatctcaagtgttggttaagggttgctgatgactgcttccctgcatca
aattttgccagttcttggagtttgggctcaattcaaagtggtgaactggctgctttgcag
gttgatgttaaaaaatatttggcccggaagccaggttggactagaatgactgatgatgga
gtgcagacacgtgctcacttggaagctcagttggcctcttctttggctttgggatcctcc
aatgaatatcgccaatgcctattgtcttatgttcgctttcttgcaagagaagctgatgaa
tctcgattacgagaagtctgtgagagtttccttggacctccaacaggcatggctgaagac
gcatcatcaaataagagtttggcatgggatcctgttgtgcttggaatgaagaaacacaaa
ctccttatcgaagacattcttccagccatggcatcaaataggaaagtccagagactgctc
aacgaattcatggatctcgtatccgaatacgaaattgctgatgctaataatcatgatcaa
agaaatccactgttactcaaaacatcttcacctgtcaccaatctaatagagagtggtcca
ttagaaacatatgtacaggacactcccgaggatgcaatatacagcaaggacatcattgat
caagtcgaaaaaagtctcgcaaatttccctcccgtacttgcaaatgaagcaagtgcacat
gatcaaattgttcaggatacaccagatcaggaatga
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integrated database retrieval system