Trifolium pratense (red clover): 123921240
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Entry
123921240 CDS
T08949
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123921240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123921240
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123921240
Membrane trafficking [BR:
tpra04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123921240
Atg1 complex
123921240
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123921240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
123921240
NCBI-ProteinID:
XP_045829650
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All DBs
Position
LG4:complement(28647344..28652791)
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AA seq
583 aa
AA seq
DB search
MDFQNNMQPELGKLEQIVYQFLLKCLHIILDSRVASIRQHDRSGDLSTGGSRVRRSDKWF
NFALGDRPSALDNLNFWHRNLMDPMIIDIILVHEENGSSVETVIERWNVQYECPRIMAPQ
ISDSTISYKKTYQKSIILFRALYSQMRLLPTHKIFRQLSSSNYTCNFDIVYKVSSFSDPF
SREEGAMMEEYIFTPVDALPGRLSLSVTYRSTLSDFNLECSTSLPTKIITDYVGSPNTDP
LRYFPSSVKGVRVPPSSTPLDRPHSWTPGFHKAAPFVQNHQYAGSPPVHRGSLKPFDFPS
PPTDNFNIRYHNRRIQSQSRSTSYDEHQLSPPFSSSLSPSPPIHSGNTMHTRMRSETAPV
SIPHPIMGKSSRNLSPNFSDPNRNSLPPLSPRRNDASSNESPSGIRSFRKIESLKFGQKI
VRDSKEDSGRFSGLLSSSDSPRVGVSRTSSKLSFQDDLDDGDFSCPFDVDDVDPPDVLSS
HNVYGKSASESPSTSLPIGRKSQDAAVGVLVHMLRTAPPLRQDSSCYSSHSLKAEVDGGV
ATASGFFMPRKTTDALEELRSYREMRDLLLSKSGTRILKRDET
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataatatgcagcctgaattgggaaaattggaacaaattgtttatcaa
tttctattgaagtgtttacacatcattttggactcaagggtagcttcgatacgtcaacat
gatagaagtggtgacctatcaacgggtggttctcgtgtgaggaggagtgataaatggttt
aatttcgccttaggtgatcgaccttctgctcttgataacttgaacttttggcataggaat
ttgatggatccgatgataattgacattatattagttcatgaagagaatggttcttctgtt
gagacagttatagagaggtggaatgttcaatatgaatgtccaagaataatggctcctcaa
attagtgatagtactatatcttacaagaaaacataccagaaatcgattatactgtttcgc
gctctttattctcaaatgaggcttctcccaactcataagatatttaggcagctaagttca
tcaaattacacttgtaattttgatattgtttacaaagtctcttcctttagtgatccattt
tctagggaagaaggagcgatgatggaagaatatattttcacacctgttgatgcgcttcca
ggccgtcttagcttatctgtgacttaccgttctacattatctgatttcaaccttgagtgt
tcaacatcattaccaacaaaaataattactgattatgttggaagtccgaatacagatcct
ttgaggtatttcccttcttcagtaaagggtgttcgtgtgcctccgtcttctacgccactt
gaccgtcctcatagttggacgcctggatttcataaagcagcaccttttgtacagaaccat
cagtatgctggatcaccaccggtgcatcgtggctctctcaagccatttgattttccatct
ccacctactgataatttcaatatcagatatcataaccgtcgaatacaaagtcagtcaagg
tctacaagttatgacgagcatcaactttctccaccattctcatcctctttatctccatca
ccacctatacatagtggcaatacaatgcatactcgtatgcgctctgaaacagcacctgtg
tctatacctcatccaataatgggcaaaagctctagaaatctttctcctaatttttcagat
cctaatagaaattctctgccccctttatctcccagaaggaatgatgcatcgtcaaacgag
tctccatctggaatcaggtcattcaggaaaatagaatctctaaagtttggtcaaaagatt
gtcagagatagcaaggaggattcagggcggttctcaggattgctatcttctagtgactca
ccacgtgttggagtttctagaacctcaagcaaattatcttttcaggatgacttggacgat
ggtgatttttcatgtccttttgatgttgatgatgttgaccctccagatgttctgtcaagc
cataatgtgtatgggaagagtgcttcagagtccccttcaacatcattaccaatagggaga
aagtcacaagatgctgctgttggtgttcttgtgcacatgctcagaacagcacctcctttg
cgccaagattcaagttgttattcatcgcattccctgaaggctgaagtcgatggaggagtt
gctactgcttctggattcttcatgcctcgaaagacaactgacgcactcgaagagctaagg
agttatagagaaatgagagaccttcttctttctaagagtggtacccggatcctgaaaaga
gatgaaacttaa
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