Trifolium pratense (red clover): 123921398
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Entry
123921398 CDS
T08949
Name
(RefSeq) protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123921398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123921398
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123921398
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
123921398
NCBI-ProteinID:
XP_045829871
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Position
LG4:complement(11976323..11978044)
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AA seq
573 aa
AA seq
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MDVTPNRRKRVRHSEGDHPHHRSDRNAKRDRKTRDEREGTKLKKRDQEMEDDFENGGVAM
GSPPATAVSPPPSFPIIKVSSISTTNNENNNFTMSHEVTGKFSTDGSSSSIAGKLSIHAL
AKAKKVLQMQKDLSEKLKRIPPPATTGVTTKAAHVLRLDAHGREIDQHGNLVVNVTKPTN
LSTLKVNINKHKIDDALFDSNPHFDNSIGINKTKLMRPKRTNFLFVQEGKWSKHAESIKL
KSKFGEAQAKDHKAKQAQLAKAKVAPHINPNLIEITERDAMKENLKDPIPEVEWWDVALL
HSGNYHDIDKDKLKMEKITFYVEHVLPIEPPAHLAPPPPQPLKLTKQEQKKLKSQRRIAK
EKERQDMIRQGVIEPPKPKLKMNNLMKVLGTEATQDPTRLEKEVRNAAAEREQAHIDRNI
ARKLTPAEKREKKKRKLFDDSNTPDRLVALYRIDDLSHPQTRIKIDRDAQYNELTGCAVI
YDGISVVVVEGKTKTIKRYGKLMLRRINSEDSNDDKPANKCVLVWQGNVAKQNFNKFSVQ
ACITEAAAQKVFVNAGVPHYWDHAVNYEDGGAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcacccccaataggcgaaagagagttcgacattccgaaggtgaccacccccat
catcgatctgaccggaatgccaaacgcgaccgcaaaaccagggacgaaagagagggtacc
aaattgaagaagcgcgatcaagagatggaagatgatttcgaaaacggtggtgttgctatg
ggatcaccacctgctactgcggtgtctcctcctccttcctttcctattattaaggtatca
tcgatttctaccacaaataatgaaaataataattttaccatgtctcatgaagttactgga
aaatttagtacagatggatcatcatcttcaattgctggaaaactctctattcatgcctta
gctaaggcaaagaaggttttacaaatgcaaaaagacttgtcggagaagctcaagagaatt
cctcctccagctactactggtgtcacaactaaggctgctcatgttcttcgtcttgacgcc
catggacgggaaatagatcaacatgggaatcttgttgttaatgtaactaagccaaccaac
ctcagcacattaaaggtcaacattaataaacacaagatagatgatgcattatttgattct
aaccctcattttgacaacagtattggcatcaacaaaacaaagctcatgcgccccaagagg
acgaattttctgtttgtccaggaaggtaaatggtcaaaacatgctgaatcaataaagttg
aagagtaaatttggagaagctcaagcaaaagaccacaaggccaaacaagcacagctagca
aaggcaaaagttgctcctcatataaatcccaacttaatagaaattacagagagagatgca
atgaaagaaaacctgaaggatccaattccagaagttgagtggtgggacgtggcacttttg
cattctggaaattatcatgacatagacaaagataaactgaaaatggaaaaaatcaccttt
tatgtggagcacgttctccccattgaaccgcctgctcaccttgcccctccaccacctcaa
cctctcaagctaaccaaacaggagcaaaagaaactcaagtcccaaaggcgtatagctaag
gagaaggagcgacaagatatgattagacagggtgtcatagaaccgccaaaaccaaagtta
aagatgaacaatttaatgaaagtgctagggaccgaagcaactcaagatcccactcggctt
gagaaggaagtacgtaatgcagctgctgagcgtgagcaggctcacatagataggaatatc
gcacgcaagcttactcctgccgagaagcgtgagaagaagaaaaggaagctgtttgatgac
tcaaatacaccggatagacttgtggcactttacagaattgacgacctctctcatccacag
actcgcattaaaattgatcgtgacgctcaatataacgagttgaccggatgtgctgtgatt
tatgatggtattagcgttgtcgtggtcgaaggtaaaaccaagacgattaagaggtatgga
aaactaatgctcagacgtatcaattccgaagattcaaatgatgacaagcctgccaacaag
tgtgttctggtgtggcaaggaaatgttgccaaacaaaacttcaataaattcagtgttcag
gcttgcatcactgaagcagctgctcaaaaagtgtttgtgaatgctggggttcctcattat
tgggaccatgctgtcaactatgaagatggcggtgctgcttga
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