Trifolium pratense (red clover): 123921490
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Entry
123921490 CDS
T08949
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123921490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123921490
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123921490
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123921490
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
123921490
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
123921490
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
123921490
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
123921490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
123921490
NCBI-ProteinID:
XP_045830019
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All DBs
Position
LG4:4552203..4557827
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AA seq
859 aa
AA seq
DB search
MVTDGTKKPKVSAVPPRKINVQKFAESRAPELLSLQSIVENRLSNDYKSQRNKRRRTTSF
NDQIARKGHRRKRQKLGRVDKVNAESVLNKDHKMKLSRHVRRRYELKSNPENGFCTSGDG
TKRLRTHVWHAKRFSMTKLWGYHLPLGLQGRGKGSRALLRKLKQGVLVHDASYNSAVQLE
GPEDVLVSVLRMVLMPSPIEATHPRNHGDSVISGLTYGTAMLHQVGAPVSRAIAPVTYMW
RPTFQESITDIGVSDGKVIPDVDLCEKPESLECSSSSRHLWVWIHASAFEEGYDNLKLAC
QKEMEKRGISIKCSSLEGQLAKLELMGPKTFQLLQKILHPVRSISENHWQLKKHVTIEEN
HVSQDMKSSILKNEEHFSSSAMLSLNVKDPRDLPAKKTVVSTEPISPKVLSDAQETNCEE
LADLGGMLEKNNDLTSLSDVDDLWYANTRGFKPPVEDSVLSMEKHRERMIKFCLDDKNFG
DANSSKVQCSRSCPILLLKNDTKELSTGWSVILPLSWVKAFWIPLITNGAQAIGLREKQW
IASDTGIPIFPQDFPDCKAYSCFMAAKAAECNEKEELRPPYVRNLRVPILPPWGIVHATF
NKEFSTMETPDLSAREDLTNANSVSNSCSGNFEISNFDSENSFDGTVARTDHVLTTLLDE
TKTGPLLLFPYAADGKARISKFIKGELMLDMRHKSSVIYDRKLCFIRVHLQPFKEGFFEE
GAVICAPHPSDISLWTSSSVKSEVGLKLSDSAMKSYFKENSSGKWEMQIPDDSIGRQSHR
WPIGFITSGCVQGSKRLSAEGFCEAVLLSHLREEQWKEMLVKQRRSEIYVLVRNLKSVAY
RLALASIVLEYQENDIEFL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggttactgacggaaccaaaaagcctaaagtttcagcagtgccacctcgcaaaatcaat
gtgcagaagtttgcagaatcccgtgcccctgagcttttgagccttcagtctatagttgaa
aatagattaagcaatgattataagtctcaaaggaacaagagaagaagaacaacatcattt
aatgaccaaattgcaagaaaggggcacagaagaaagaggcaaaaactgggtagagttgat
aaagtcaatgctgaatcagttttgaataaggaccataaaatgaagctttctcgacatgtt
cgtcgaagatatgaacttaagagtaaccctgagaatggcttttgcacttctggggatgga
accaagaggctgagaacacatgtttggcatgcaaagcgattttccatgaccaagctgtgg
ggttaccaccttcctctcggtcttcaaggaagagggaaaggttcgcgggcattgttgaga
aagctcaaacaaggggtgctggtacacgatgcaagctataactctgctgttcaattggag
ggtccagaggatgtgttagtttcagtattaagaatggtactcatgccctctcctatagaa
gcaacacatcccagaaatcatggtgactccgttatttctggtttaacctatggaactgca
atgcttcatcaagttggagcaccagtttctcgggcaattgctcctgtaacttatatgtgg
cgaccaactttccaagaaagtatcacagacataggtgtcagtgatggaaaagttatccct
gacgttgatttatgcgaaaaaccagaaagcttggagtgtagtagttcttctagacacctt
tgggtgtggatacatgcttctgcctttgaagaaggatacgataatctaaaactggcctgc
cagaaagagatggaaaagagaggcatctcaatcaaatgttcttcgcttgagggtcaactt
gccaaattggaattaatgggaccaaagacatttcaacttcttcagaagatattgcatcct
gttagaagtatttcagaaaatcattggcagttaaagaaacatgtgactatagaagaaaac
cacgtttctcaggatatgaaatcttccatactgaaaaatgaggagcatttttcttcgtct
gcaatgttatctcttaatgttaaggatcctcgggatttacctgcgaaaaagactgttgtt
tcgacagagccaatttcacctaaggttttaagtgatgcacaagaaactaattgcgaagag
cttgctgatttgggaggaatgttggaaaagaataatgacttgacttctttatctgatgtt
gatgatctatggtatgctaataccagaggctttaagcctccagtggaagacagtgttctt
tctatggagaagcaccgtgaacgcatgattaaattctgccttgatgacaaaaattttggg
gacgcgaactcttccaaagtgcagtgctcaagatcttgccctattctgcttttgaaaaat
gatacgaaggaattatccacaggatggtctgttatacttcccttaagttgggttaaagcc
ttctggattccactcatcactaatggagcacaggcaataggtttgcgagaaaagcagtgg
attgcatctgatacggggataccaattttccctcaagatttcccagattgcaaggcatac
tcatgcttcatggctgctaaagctgccgaatgtaatgaaaaagaagaacttcgtcctcct
tatgtaaggaatttgagagttccaatcctgcctccatggggtattgttcacgctactttc
aacaaagagtttagcacaatggagactccagacctttcagccagggaagatttgaccaat
gctaattcggtgtcaaactcttgctctggcaactttgaaatttcaaatttcgactctgag
aattcatttgatggaactgtagcaaggacagatcatgtgttgactactttactcgatgaa
acaaaaactggcccattgctgttatttccttatgcagcagatggaaaggccagaatctct
aagtttattaagggagaactaatgctcgatatgaggcataaaagttctgtcatttatgac
cgtaagctatgttttataagagttcatcttcagccattcaaggaaggcttttttgaagag
ggtgcagttatttgtgcaccacatccttctgatatatctttatggacttcaagttcagtg
aaaagtgaagtgggacttaaactgtctgattctgctatgaaatcatatttcaaagagaat
tcctccggtaaatgggaaatgcagataccagacgattcaatcggcagacagtctcaccgg
tggcctattggcttcatcacgtcaggttgtgttcaaggaagcaagaggctttcagcagag
ggattttgtgaggccgttttactatctcatttaagagaggaacaatggaaggagatgctc
gtgaagcagaggagaagcgaaatatacgtacttgtcaggaatttaaaatctgttgcatat
aggctagctcttgcttctattgtcctagaatatcaggaaaatgacattgaattcttgtaa
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