Trifolium pratense (red clover): 123921625
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Entry
123921625 CDS
T08949
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00061
Fatty acid biosynthesis
tpra00071
Fatty acid degradation
tpra01100
Metabolic pathways
tpra01212
Fatty acid metabolism
tpra04146
Peroxisome
Module
tpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123921625
00071 Fatty acid degradation
123921625
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123921625
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpra01004
]
123921625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123921625
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123921625
Lipid biosynthesis proteins [BR:
tpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123921625
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123921625
Exosomal proteins of breast cancer cells
123921625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123921625
NCBI-ProteinID:
XP_045830210
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Position
LG1:33299699..33305213
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AA seq
661 aa
AA seq
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MSEVYTVKVEEGRSATSDGKPSVGPVYRCIYAKDGLLELPSGLESPVDFFRDSVKRNPDN
QMLGRRQKLDSKAGPYSWLTYKEVYDASIQMGSAMKSRGVNPGDRCGIYGANCPEWIIAM
EACNSSAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQENKIPSILSCLDQCSSNLKTIVS
FGNISATQKKEAEEFGTTCFSWGEFLQLGSLDWDLPPKKKTDICTIMYTSGTTGEPKGVI
IKNEAFMSEVLSIDQIIRLTDKVAADDDVYFSFLPLAHVYDQIMATYCIFKGSSIGFWQG
DVRFLMEDVHALKPTIFCGVPRVFDRICAGIKSKVSSAGSLQSALFQYAYNYKLKYLEKG
LPQHKAAPLFDRLVFEKTKQALGGRVRILLSGAAPLPIHVEECLRVVSGSTLSQGYGLTE
SCAGCFTAIGDVFSMIGTVGIPMTTIEARLESVPEMGYDALSSEPRGEICLRGNSLFSGY
HKRQDLTEEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIESKYLQC
PLITSIWVYGNSFESFLVAVVVPERKALEDWAVEHNFTGDFKSLCENLKARTYILDELKS
TGQKLQLKGFELLKAIYLDPTPFDIERDLVTPTFKLKRPQLLKYYKDQIDELYKEAKRTM
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtttatactgttaaggttgaggaaggaaggtctgctacatctgatggaaag
ccatctgtaggacctgtctatagatgcatttatgccaaagatggtcttttggagttgcct
tctggtttagagtccccagtggatttcttcagggattctgttaagaggaaccccgacaac
caaatgcttggaaggcgtcaaaaactcgattctaaggcgggaccttattcatggctcaca
tataaagaggtctatgatgcttccatccaaatgggatctgccatgaaaagccgcggtgtc
aatcctggagatcgttgtggcatatatggagccaactgtcctgaatggatcattgcaatg
gaggcttgcaatagctctgcagtaacatatgttccattatatgacactcttggtcctaat
gcggtggagtttatcataaaccatgctgaagtttcaattgcatttgtacaggaaaataag
attccatcaattttgtcatgtcttgatcagtgttcttcaaatctcaaaactattgtgagc
tttggaaatatttctgccacacaaaagaaggaagccgaggaatttggcacaacctgcttc
tcctggggagagtttctccagttgggaagtttggattgggatctaccaccaaaaaagaag
actgatatttgcacaataatgtacacaagtggaacaactggtgaaccaaaaggtgtcatt
attaaaaatgaggctttcatgtctgaagtgttatctattgaccaaattattaggttaaca
gacaaagtggcagcagatgacgatgtctacttctcctttcttcctcttgctcatgtgtac
gaccagataatggcgacctattgcatcttcaagggctcctcaataggattttggcaaggc
gatgttaggttcttaatggaagatgttcatgcactgaaaccaactatattttgtggtgtt
cctagagtttttgaccgtatttgtgccggtatcaaaagcaaagtttcatctgctggatca
ctacaaagtgcattatttcagtatgcatacaactataagttaaaatatctagagaagggt
cttccacagcataaagcagcacctctgtttgataggcttgtgtttgaaaagacaaaacaa
gcactaggtggacgcgttcgtatcctgctatcaggagctgcgcctttgcctatacatgtg
gaggagtgtttgagagttgttagtggatccacattatcacaaggatatggtcttactgaa
agctgtgctgggtgtttcacagcaatcggcgatgtgttttctatgattggaacagttgga
attcccatgacaaccattgaggccaggcttgaatctgtaccggagatgggatatgacgca
ctttccagtgaaccccgtggagaaatttgcctgagaggaaattctttgttttctggttat
cacaagcgacaagatcttactgaagaggttatggttgatggttggtttcatacaggcgat
atcggagaatggcaaccaaatggagccatgaaaattattgataggaaaaagaatatcttt
aaattgtctcaaggagaatacattgctgtagagaatatcgaaagcaagtatctgcaatgc
cctcttataacatcgatttgggtatatggaaacagttttgagtcattcttagtggctgtg
gtggttcctgaaagaaaggctcttgaggattgggcagtagagcacaattttactggtgat
tttaaatctttatgtgaaaatctaaaggctagaacatacattttggatgagctcaaaagc
actggtcagaaactccaacttaaaggatttgagctgctgaaagctatttatctggatcct
actccttttgacatagagagagatctagtaactccaacatttaaattgaagagacctcag
ttactgaaatactacaaggatcagattgatgaactatacaaggaagcaaagcgaacaatg
gcatga
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