Trifolium pratense (red clover): 123921641
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Entry
123921641 CDS
T08949
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123921641
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123921641
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
123921641
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Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
PhoH
Cellulase
Motif
Other DBs
NCBI-GeneID:
123921641
NCBI-ProteinID:
XP_045830225
LinkDB
All DBs
Position
LG4:complement(5840038..5845914)
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AA seq
906 aa
AA seq
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MNKNQQENPNFSAFPFKPYSIQIDFMNALYQSLNQGGISMLESPTGTGKTMSVICSALQW
VVDRRRQQEEEKALGLMSGKNEGLDDEPDWMRDFVVNNNDQKEVKRKIKKEKFRAVLGKS
DNDCRKKNIGDLKKKIDEVGDDEDEFLLEEYESEDEKVEGTSVVSKRKASKSSFSSSSED
ESGDDDEEEEEEKKLKVYFCSRTHSQLSQFVKELRKTVFADEIDVVSLGSRKNLCINQEV
LALGNSTRINERCLELQKKKKNDATKVKNIRVGTGARRTKASSGCPMLKKHRLQKEFRDE
VSQQGPLDIEDLANLGRTMGTCPYYGSRSMVRKVDLVVLPYQSLLSKSSREALGLNLKSN
IVIIDEAHNLADSLINMYDSKITLSQLENVHRHVERYFVRFRNLLGAANRRYIQTLMVLI
QAFLRVLLNEKDGNLIDSCRDIEQASEERRASDFTMAINDFLFELNIDNINLVKLVKYIK
ESNIMHKVSGYGEKMATLEKVSALNVTGEHGEDGSCQSAFQALADMLLSLVNKDSDGRII
ISRSSSTSFRKQGQGRYIKYVMLSAEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWL
QSNQLHFFSCGHIVPPESIMPIAVSRGPSGRSFDFSYSSRSSADMMRELGLLLCNLVSVV
PQGIVVFFPSFDYESRVYENWESSDILARITKRKRVFREPRNNMDVESVLKEYKDTIYSP
SSVTSEVNQASHTGAVLLAVVGAKLSEGINLSDGMGRCVIMVGLPYASPSDIELLERIKH
IDGFKNSKSLDNPGISASYDVYGGDIQGGFSILRNSSHRGKEYYENLCMKAVNQSIGRAI
RHINDYAAILLVDTRYASDSSKRSFTHPTTKLPNWIKDRLVTSTKNYGEVHRSLHQFFKL
KKTCCQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatcaacaagaaaaccccaatttctcagcgttccctttcaaaccctattct
attcaaatcgatttcatgaacgccctttatcaatctctcaatcaaggtggcatctccatg
ttagaaagcccaactggtactggaaaaaccatgagtgtaatttgtagtgcattgcaatgg
gtggttgatcggcgacgacaacaagaagaagaaaaagctctagggttaatgagtgggaag
aatgagggtttggatgatgaacctgattggatgagagattttgttgttaacaataatgat
cagaaagaggtaaaaagaaagattaagaaggagaaatttagggctgtgttaggaaaatct
gataatgattgtaggaaaaagaatattggtgatttgaagaagaaaattgatgaagtgggt
gatgatgaagatgagtttttacttgaagaatatgagagtgaagatgagaaagttgagggt
actagtgtagtgtcaaagaggaaagcgagtaaaagtagttttagttcttcgagtgaagac
gagtctggtgatgatgatgaggaggaggaagaggagaagaagttgaaggtttatttttgt
agtaggacacattcacagctttcacagttcgtaaaggagttgaggaagacggtgtttgct
gatgagattgatgttgtgagtttaggttccaggaaaaatctttgtattaatcaagaagta
cttgcacttggaaattcgactcgcataaatgagagatgcttggaactccaaaagaaaaag
aaaaatgatgctacaaaagttaagaacataagagtaggtacaggagcacgcagaacaaag
gcctcctctggttgcccgatgcttaaaaaacatagactacaaaaagaattcagggacgag
gtatctcaacaagggcctttggatattgaagatcttgctaaccttggtagaactatggga
acttgtccttactatggctctagaagcatggttcggaaagttgatcttgtggtccttcca
tatcaatctcttctttcaaaatcatctcgtgaagcacttggtctgaatttgaaatcgaac
attgttataatagacgaggctcataatttggccgattcactcatcaatatgtatgactcc
aaaattactttatcacagctagagaatgtgcatcgtcatgtggagcggtactttgtgaga
ttccggaaccttttgggagctgctaataggagatatattcaaactctgatggtcctcata
caagcatttctccgggtactactcaacgagaaagatggaaatctcatagattcatgtcgt
gatatagaacaggcttctgaagaaaggagggcctctgattttactatggccatcaacgat
tttttatttgaactaaatatagacaatatcaacttggtcaaattggtaaagtacataaag
gaaagcaatatcatgcacaaggttagtggctatggagaaaagatggctaccttggagaag
gtatcagcacttaatgtaacaggggaacatggtgaagatggaagctgtcagtctgctttt
caggcattagctgacatgttgctatcactggtaaacaaggacagtgatggaaggataata
atttccaggtctagttcaacaagcttcaggaaacaaggtcaaggaagatatattaaatat
gttatgctcagtgcagagaagattttctccgagattgtagatgaagcacatgccgtcgtg
ttagtaggcggaacacttcagccaatagaagagacaagggagagactctttccatggtta
caatcaaatcaactgcacttcttttcttgtggtcatattgtgccgccagagagcattatg
ccaatcgcagtttcccgtgggcctagtggccgctccttcgattttagctacagctccagg
agctcagcagatatgatgcgagaattaggtctcttgttatgcaacttggtgtctgtagtt
ccccaaggaattgtagtcttcttcccttcttttgattatgaaagtagagtctatgaaaac
tgggagtcttctgacatccttgcaaggattacaaagaggaagcgtgtctttagagagcct
agaaacaacatggacgttgaatctgttctcaaggaatataaagataccatttattctcca
tcaagtgtgacttcagaagtaaaccaagcatctcatactggtgcagtactccttgctgtc
gttggtgcaaagttatctgaagggatcaacttgagtgatgggatgggtcgatgcgtaatc
atggttggtctaccatatgctagcccttctgacattgagttattggagaggataaaacac
atcgatggttttaaaaattccaaatcccttgacaatcctggaatttctgctagttatgat
gtatacggaggagatatacaaggtggttttagcatattaagaaatagcagtcacagggga
aaggagtattacgagaatctctgcatgaaagctgtaaatcaatcaataggtagagcaatt
cgtcacatcaatgattatgcagctattttattggttgacacaaggtatgcatctgattcc
tcaaaacggagttttacccacccaaccaccaagctccccaattggataaaagatcgcctc
gttacttctaccaaaaactatggtgaagtgcataggtcgctgcatcagtttttcaaactc
aaaaagacatgttgccaatag
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