Trifolium pratense (red clover): 123921646
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Entry
123921646 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123921646 isoform X1
KO
K17925
sorting nexin-13
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpra04990
]
123921646
Domain-containing proteins not elsewhere classified [BR:
tpra04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
123921646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
123921646
NCBI-ProteinID:
XP_045830228
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All DBs
Position
LG4:complement(5852942..5862364)
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AA seq
1158 aa
AA seq
DB search
MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLLIIFRYL
SLDYEMKRKAAAYNNKSGSTSVQSSKKPTENPKAVAKFEWRAKVNSPVVEDAIDHFTRHL
ISEWVTDLWYSRLTPDKEGPEELVQIVNGVLGEISGRMRNINLIDFLIRDLVNLICTHLE
LFRAAISKIEKQHTDSLTIERRDTELKIVLAAEDKLHPALFSSEAEHKVVSLSCSTCMHG
VMGNFVFTHGSSFCFSDFLIWDYNAACIFIFQVLQHLMNGLMSVTFKSEDLQCSFFRYIV
RELLACAVMRPVLNLANPRFINERIESVVINKTKANKGVDAAQGLSPIKEDESQTSSDHF
SKCLDPSATGVELTQLKNGQSRNPEPSTERNVSDNLSRDPLLSMDTRSSRSWNSLPGNSQ
SNGDQGIQRYRSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAP
QHPSTGKSLKIDHMKATSGPKEHDTRLKLNTSKGGHINSGYSSQFTVENASVHTDKNGST
CSSVTSYKDDEDSHINRNMSESESNTSYTSEDDETSTVTGLDSPVTKVWDGKSIRNQAVS
YVHHPLENVDSHSTKKRNKNHSRYPRSFRTQSGSKRSRSSDLKTNMWQEVERSSFLSGDG
RDILGSPKPPVNSDGSSDDADFESLGRIYSGAAASSSSISKSESCSLAVNPLRSSSAVDS
FYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFSEYNL
HLPPKHFLSTGLDVATIQERCELLDKYLKKLMELPTVSESIELWDFLSVDSQTYVFSNSF
SIMETLPVGLDAKSSEKTKISSNVSAPGSDSFLQTKNHAVANGSRPTVNSTPLSLPSKKN
TRESRQSFDNSGSNADILPRKSAHSPNNLQKSVKGRDSSNELSDVQHDTAETLPTEWVPP
NLSVPILDLVDVIFQLQDGGWIRRQAFWVAKQVLQLGMGDALDDWLLEKILLLRKGSVIA
SGVTRVEQILWPDGIFLTKHPNRRPPTGPSQSSPNGHQSTPVSTPRMDDEQQREADRRAK
FVYELMIDHAPPAIVGLVGKKEYEQCARDLYFFLQSSVCLKLLAFDLLEMLLLSAFPELD
DVFKQVHEEKHRFGELVK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgccgaaacctaatcaagtagcagttagagacctcgttgaagaagctaagaaa
cgaattgtgattctcatcgtttgcgttgttggactctcctatctaatgtcattgacaagc
tcctcagtttgggtcaacttgcctgctgcagcctccttacttatcattttccgctattta
tcactggattatgaaatgaagagaaaagctgcagcatacaacaataaatcaggctccacc
agtgttcagtcttcaaagaagcctaccgaaaatcctaaagcagttgcgaagtttgagtgg
cgagcaaaagttaattctcctgttgttgaggatgcaattgatcacttcaccagacatctg
atttctgagtgggtgacagacctttggtactctcgcttaacaccagacaaagagggtccc
gaggagttggtgcaaatagttaatggtgttcttggtgaaatttcaggacgcatgagaaat
ataaatctgattgattttttgataagggatcttgttaatctcatttgcactcacttggag
ctgtttcgtgctgctatctcaaagattgaaaaacaacacacagattcattaacaattgaa
agacgggatacagagctaaaaattgtgttggcagcagaagacaaattgcatcctgcttta
ttctcttctgaagctgagcacaaggttgtttcactttcttgttctacatgcatgcatggc
gtaatggggaattttgttttcacccatgggtcaagcttctgtttctcagatttcctaatt
tgggattataatgctgcgtgcatctttatttttcaggttttgcagcatctgatgaatggt
cttatgtctgtcactttcaagtctgaggatctgcagtgttctttctttcgatatattgtc
agggagcttcttgcatgtgctgtaatgcgacctgtcctaaatttagccaatccaagattt
attaacgaaagaattgaatctgtggtaattaataagaccaaggctaacaagggggttgat
gcagctcaagggctatcccccattaaagaagatgagtcacaaacttcatctgatcatttt
tccaagtgtttagatccttctgctactggtgttgagcttacacagctaaaaaatggtcag
tccagaaatccagagccatctacagaaagaaatgtttctgataacctttctagagatccg
ttgctttcaatggatactcgatcttcccgttcatggaactctttgcctggaaactcacaa
agtaatggtgaccaaggtattcaacgatatcgctcaggaggagaatggggagatatttta
gatgtcgtctctcgaagaaagacccaaactcttgcaccagaacattttgagaatgtttgg
gcaaagggcaaaaattaccagaaaaaggatggagagaaccagtcaaatgagcgagcccca
caacatccctcaacaggaaaatcactcaagatagatcatatgaaggcaacatctggaccc
aaagaacacgatactagattgaagcttaatacctctaagggaggccacattaattctgga
tacagcagtcaattcactgttgaaaatgcatccgttcacacagacaagaatggatcaact
tgttcttcagttacctcatataaagatgatgaggacagccacattaataggaatatgagt
gaatcagagagcaatacttcttatacttctgaagatgatgaaactagtactgttactggt
cttgattcccctgtaactaaggtttgggatggaaaaagtatcagaaaccaggctgtttct
tatgttcatcacccacttgaaaatgttgatagccacagtacaaagaaaaggaataagaac
cattcccgttatccgagatcattcagaacacaatctggcagtaaaaggtcccggtcaagc
gatttaaagacaaatatgtggcaggaagttgagaggtcaagctttttatctggtgatggt
cgagacatacttggctctccaaaaccacctgtgaattctgacggatcctctgatgatgct
gattttgaaagtttgggtagaatttatagcggagcagctgcctcttcgtcctcaatttct
aaatcagaatcttgcagtttggctgttaatcccctgagaagttcttctgccgtagattcc
ttttacaagttgagatgtgaggtcttgggtgcaaatattgtcaagagtggttcaagaaca
tttgccgtttattccatatctgttacagatgtaaataataacagttggtcaattaaaaga
aggtttcgtcattttgaggagctgcatcggcgcctgaaagagttctccgagtataatctt
catttgccacctaaacattttctgtcaactggtttagatgtagcaaccattcaagaacgg
tgtgaattgcttgataaatatttgaagaaacttatggagctacctacagtttcagaatca
attgagttatgggactttttgagtgttgactctcagacgtacgtattctcaaattctttt
tctataatggaaacattaccagttggcctggatgctaagtcgtctgagaagactaaaatc
agttccaatgtttctgcacccggaagtgattcttttttgcaaacaaaaaatcatgccgtg
gctaatggatcgaggccaacagtaaatagcacgcctctttctctaccatcaaaaaagaat
acacgggaatcaagacagtcatttgacaattctggaagcaatgcagatattctaccaagg
aagagtgcacattctcccaataacttgcagaagtcagtgaaaggaagagatagttcaaac
gagctctctgatgtgcagcatgatactgctgaaactcttccaacagagtgggtgccacct
aatttaagtgtacccatattggatctggttgatgttatcttccagctgcaagatggtgga
tggattaggaggcaggctttctgggttgctaaacaagtcttacaactaggaatgggtgat
gccttagatgattggttgttagagaaaattctgcttctccgaaagggatcagtgattgct
tcaggggtcacacgagttgagcaaatactctggcctgatggaattttcttaaccaagcat
ccaaatcgacgaccacctaccggtccatctcagagttcacctaatggccatcaatctaca
ccagtatctactccaaggatggatgatgagcagcaacgagaggcagatcggcgcgcaaag
tttgtatatgagctaatgatcgatcatgcaccaccagcaattgtaggtcttgtcggaaag
aaggagtacgaacaatgtgcaagggatctttatttttttcttcagtcatctgtttgcttg
aagctgctggcttttgatctcctggagatgctgcttttgtcggcatttcccgaacttgat
gatgtattcaagcaggtgcatgaagaaaaacatagatttggtgagctcgtcaagtaa
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