KEGG   Trifolium pratense (red clover): 123921700
Entry
123921700         CDS       T08949                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    123921700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123921700
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     123921700
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_RIG_2nd RAWUL WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 123921700
NCBI-ProteinID: XP_045830308
LinkDB
Position
LG1:complement(13868952..13885727)
AA seq 762 aa
MHHAGSVGNPNNFTRPRKEKRLTYVLNDSDDTKHCAGINCLAVLKSAASDESDYLFTGSR
DGKLKRWGLAVDAATCSATFESHSDWVNDAVLVGDSTLVSCSSDTTLKTWNALSTGTCTR
TLCQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDIEAALASASKCNDAMDDDASNGVNS
SGNSLPMTSLRTIGSSNSISMQAQTEGYIPVAAKGHKESVYALAMNEGGTLLVSGGTEKV
VRVWDPRSGSKTMKLKGHTDNIRALILDSTGRLCLSGSSDSMLRLWDLGQQRCVHSYAVH
TDSVWALASNSTFSHVYSGGRDSSLYLTDLHTRESVLLSTGEQPILQLALHDDSIWVAST
DSSVHRWPAEVCNPQKIFERGNYFLAGNLSFSRARVSLEGSTPVPEYKQPILTIPGIPAI
VQHEVLNNKRHVLTKDTSGSVKLWEITKGVAIEDYGKVPFDEKKEELFEMVSVPAWFTVD
TRLGSLSVHLDTPQCFSAEIYSQELNIVEKPEDDKINLARETLKGLLVHWLRKRKQRMGT
HASANGELLSENNIGTRSLSHSRVEVDGSSEIDTIVYPPFEFSIASPPSIITEGTHGGPW
RKKITDLDGTEDDKDIPWWCLDCVLNNRLPPRENAKCSFYLYPYEGSTVQIVTQGKLSAP
RILKIHKVINYVVEKIVLDKPLDSINAEGSHPSGPGSQLQHQTVGDGSSRSGSKPWQKVK
PSTEILCNNQILSPEMSLATVRAYVWKKTDDLVLHYRVILGK
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgcaccacgcgggtagtgtagggaatccaaataattttactcgcccgcgtaaggagaag
agattgacatacgtgttgaatgattctgatgacacaaagcattgtgccggcataaattgc
ttggctgtacttaagtctgcagcatctgatgaatctgattatcttttcaccggaagccgt
gatggcaaactaaaaagatggggtctagctgtggatgcagcgacatgctctgcgaccttt
gaatctcactcggattgggtaaatgatgcagtacttgtgggtgatagtacacttgtttct
tgttcttcagatacaacccttaagacatggaatgcattgtctacgggaacatgtaccagg
acactctgccaacactcagattatgtcacttgtcttgcagcagctgaaaaaaatagcaat
attgttgcctcgggtggccttggcggggaggtttttatctgggatattgaagctgcactt
gcttcagcttcaaagtgcaatgatgctatggatgatgatgcttcaaatggtgtcaatagt
tctggaaactctttgccaatgacaagcttacgtaccatcggctctagcaacagtatatcc
atgcaagcccaaactgaaggatacattccggttgctgccaaaggccataaggaatctgtt
tatgcattggcaatgaatgaaggtggaacacttcttgtctccggtggtacagaaaaggtt
gtacgtgtttgggatccaagatctggatcaaagactatgaagctaaaagggcatacagat
aacattagggctttgattctggattctaccggcaggttatgtttatcaggatcttcagac
tctatgttaaggctttgggatctcggtcagcaaagatgtgtgcattcttatgctgttcat
acagattctgtttgggctcttgctagcaattcaacgtttagtcatgtttatagtggtggt
agagactcttctttatacttgacagatttgcatactagagagagtgttttgcttagcaca
ggggaacaaccaatccttcaattggctttgcatgatgatagcatatgggtggcatcaaca
gactcatcagttcacagatggcctgctgaagtatgcaaccctcaaaagattttcgaaaga
ggcaattattttttagctggaaatttgtcattttcaagagcaagggtgtctctagaagga
tctacccctgttcctgaatataaacagcctatcttgactattcctggcatccctgcaata
gtacagcatgaagttttaaataataagaggcatgtgctaactaaggatacttctggttcg
gtgaagttatgggaaatcacgaaaggtgttgcaattgaagattatggaaaggtaccattt
gacgagaaaaaggaagagctatttgagatggttagcgttcctgcatggttcacagtggat
accagacttggaagtttgtctgtacatttggacaccccacagtgcttttctgctgagatt
tattcacaagagcttaacatcgtagaaaagcctgaagatgacaagattaacttggctcga
gaaacactgaaaggactcttggttcattggttgaggaaacgaaagcaaaggatgggaact
catgcttctgctaatggggagttattgtctgaaaataatattggtactagaagtctttca
cattcaagagttgaggttgatggaagttctgagattgataccattgtttatcctcctttt
gaattctcaattgcttcccccccttccattattaccgagggaactcatggaggtccatgg
aggaaaaagattacagatttagatggaactgaggatgataaagacatcccctggtggtgt
ctggactgtgtattgaataaccgattacctcctagagaaaatgccaaatgcagtttctat
ttatatccttatgaaggctctactgtccagatcgtcactcaagggaagctaagtgctcca
cgtatattaaaaattcataaggttattaattatgttgtagaaaagattgtgcttgacaaa
cctttggatagtatcaatgccgaaggtagtcatccctctgggcctgggtcacagttacag
caccaaacagttggggatggatcttcccgatctgggtctaaaccttggcaaaaagtcaaa
ccttctaccgaaatattgtgcaacaatcagatattgtctccagaaatgagcttagccaca
gtgcgagcttatgtatggaagaaaacagatgaccttgtcctacattacagagtaattctt
gggaagtga

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