Trifolium pratense (red clover): 123921780
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Entry
123921780 CDS
T08949
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123921780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123921780
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123921780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF4962
Motif
Other DBs
NCBI-GeneID:
123921780
NCBI-ProteinID:
XP_045830415
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Position
LG1:51785552..51790165
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AA seq
263 aa
AA seq
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MANLPPQSPSMKKDKSNSSSSSINSTRMMYAKRLVIELNNPDLRENALTVLSKMTDLFQE
LASVLWNSFGIIATFLQEITSIYPVISTPDLTPQQSARVCNVLALLQCVASHYDTKISFL
KANMPIYLYPYLRTTNNSAPYEDLRLASLGVIAATVKVKTREAIDFLLASEVMPLCLQSI
DVGRELSKTVATFIVEKILSDHVGMAYVCVIPERYHAVIGALDMLAKAQNQPSSRLVKLL
VSCYTYLSEKQVMFLPKTIPPPS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctcccccctcaatcaccctctatgaagaaagataaatcgaattccagttcc
tccagcattaattccaccaggatgatgtacgcaaaacgtcttgtaattgaactgaacaat
cccgatctacgagaaaatgctcttactgtgctttccaagatgacagatttatttcaagaa
ctcgcgtcagtattgtggaattcttttggtattattgcaacatttttacaggaaataact
tcaatatatcctgtaatttcaactccagatcttactccacaacaatcagctcgagtatgc
aatgttcttgccctacttcagtgtgtggcatcccactatgatacaaagatatcatttctg
aaagctaacatgcctatatatttgtatccctatcttcgcacaacaaacaattcggcacca
tatgaggatttgagacttgctagtcttggagtcattgctgcaaccgtgaaggttaagacc
agagaagccatagatttccttctggcaagtgaagtcatgccgctgtgcctccaaagtatt
gatgttggcagagaactgtcaaaaactgtagcaacttttattgttgagaaaattctgtca
gatcacgttggtatggcttatgtttgtgttataccagaacgctatcatgcagtaatcgga
gctttggacatgttggcaaaagctcagaatcaaccttcatcgaggcttgtgaagctgttg
gtttcgtgttatacttatctctcggaaaaacaagtaatgtttttgccgaaaacaattcca
ccaccatcttaa
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