Trifolium pratense (red clover): 123921804
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Entry
123921804 CDS
T08949
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123921804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123921804
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
GTPases
123921804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EF-G_D2
GTP_EFTU_D2
EFG_III
EFL1
SRPRB
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
123921804
NCBI-ProteinID:
XP_045830441
LinkDB
All DBs
Position
LG4:complement(40409696..40413069)
Genome browser
AA seq
1023 aa
AA seq
DB search
MEESTSDNDRHKIRNICILAHVDHGKTTLADQLIATAGGGMVHPKVAGKLRFMDFLDEEQ
RRAITMKSSSISLNYNHHTINLIDSPGHIDFCGEVSTAARLSDGALILVDAVEGVHIQTH
AVLRQCWIERLSPCLVLNKMDRLITELKLTPSEAYVRLLRIVHEVNSIVSAYNSQKYLSD
VDSLLAGGTADGGEVMEDYDDVEDVFQPQKGNVVFACALDGWGFGIHEFAEIYASKLGAS
VSALQRALWGPRYFNPKTKMIVGKKGIGAGSKPMFVQFVLEPLWQLYQGSLEGDKGLIEK
VIKAFNLQVPARELQNKDSKVVLQAVMSRWLPLSDAILSMVVKCMPDPVAAQGSRISRLI
PQREVGSGDGVDRRVVEEAELVRKSVEGCDWRDEVPCVAFVAKMFALPVKMLPPPQVGEV
VGSFGEEGEGESDECFLAFARIFSGVLSVGQRVFVISALYDPLKGESTQKHIQEAELKSM
YLMMGQGLQVVKSAKAGDVVAIRGLGQYILKSATLSSTRNCWPFSSMAFQVSPILRVAIE
PSDPADMGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFAKVSL
EVSPPLVSYKETIEGEVSNMLENLKVLSKNLDYVEKTTPNGRCIVRVQVMKLLPSLTKVL
DESADILGDIIGIKSGQTVKSLETQGTNILENGNPAEVIKTRIMDAIESDILCRIENDED
HAEKCRLKWLKLLRRIWALGPSYMGANVLFTPDIKAESSDSSVLIRGSSQLSERLGFVAD
SANSNSVSEASSNESQALYMDAERLESNVITGFQLATSAGPLCDEPMWGLAFVIEARITP
STGHDESETHQQSDQYGIFAGQVIATVKDACRTAVLKNKPRLVEAMYFCELNTPNEFLGP
MYGVLSRRRARILKEEMQEGSPLFTVHAYVPVSESFGFTDELRSRTSGAASAILVLSHWE
ALLEDPFFVPKTEEEIEEHGNGSSVLPNTARKLIDTVRRRKGLHVEEKVVQHGTKQRTLA
RKV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcaacttccgataacgatagacacaaaatccgcaacatatgcatcttagca
catgtagaccacggcaaaacaaccctggctgatcagcttatcgccaccgccggcggcggc
atggttcatccaaaagtagcaggtaaactccgtttcatggatttcctcgacgaagaacaa
cgtcgtgctataacaatgaaaagttcatctatttctcttaactacaatcaccacacaatt
aatctaatcgattcccccggtcatatcgatttttgcggcgaagtttccaccgccgctcgt
ctttccgatggagcacttattcttgttgatgctgttgaaggtgttcatattcaaactcac
gctgttcttcgtcaatgttggattgaacgtctttcaccttgtcttgttcttaataagatg
gataggttaattactgagttgaaacttactccttctgaagcttatgttcgtttattgagg
attgttcatgaggttaatagtattgttagtgcttataattcacagaaatatttatctgat
gttgattctcttcttgctggtggtactgctgatggtggtgaagttatggaggattatgat
gatgttgaagatgtttttcagcctcagaaagggaatgttgtgtttgcttgtgctttggat
ggttggggttttgggattcatgaatttgcagagatttatgcttcaaagcttggtgctagt
gttagtgcattacagagggctttatggggtccaagatattttaatcctaagactaagatg
attgttgggaagaaagggattggtgctggtagtaagcctatgttcgttcagtttgtgttg
gagcctctttggcagctttatcaaggatcacttgaaggggataaagggttgattgagaag
gttattaaggcttttaatttacaggttccggcgcgtgagttgcagaataaggattctaag
gttgtgcttcaagctgttatgagtcgttggcttcctctttcggatgctattttgtctatg
gtggtgaagtgtatgccggatcctgtggcagcgcagggttctaggatatcgcggttgatt
ccacagcgtgaggttggttctggagatggggttgataggagggtagtggaagaggcggag
cttgtgaggaagtcggtggaggggtgtgattggagggatgaggttccttgtgttgcattt
gtggcgaaaatgtttgctctacctgttaaaatgcttcctcctcctcaagtaggggaggtt
gtggggagttttggtgaggaaggtgagggtgaatctgatgagtgttttttggcatttgct
aggatatttagtggtgttttgtctgttgggcagagagtttttgtgatttcggctttgtat
gatcctttgaaaggggaatcgacgcaaaagcatatacaggaggctgaattgaaatccatg
tatctgatgatggggcaagggttgcaagtagtgaaatctgcgaaagcaggagatgttgtt
gcaatccgaggacttggccaatatattttgaaaagtgctacactttcttctactaggaac
tgttggcctttttcgagtatggcttttcaagtttccccgattttgagggttgctattgag
ccatctgaccctgcagatatgggtgcactgctcaaaggcctgaggcttttaaatcgagcg
gatccgtttgttgaggtcacagtttctgcaagaggagagcatgttcttgctgcagctggt
gaagttcatcttgagagatgcataaaggatttgaaggataggtttgcaaaagtaagcttg
gaagtctctccaccccttgtgtcctacaaagagaccattgagggagaggtatccaacatg
ctggaaaatttgaaagttctcagcaagaacttagattatgttgagaaaacaacacccaat
ggaagatgcattgtacgtgtacaggtgatgaaacttttaccttctctcacaaaggttctt
gatgaaagtgctgatatacttggagatatcattggaataaagtcagggcagacagttaaa
agtttagaaactcaggggacaaatattctcgaaaatgggaatccagctgaagtgattaaa
acacgtataatggatgcaattgagagtgacattttgtgtaggattgagaatgatgaagac
catgccgagaaatgtagattgaagtggttaaagcttttgaggaggatatgggcacttggt
ccgagttacatgggcgctaacgttctcttcactcctgatattaaagcagagagtagtgat
agctctgttctaatacgtggttcttctcaactatctgaaaggttgggttttgtggctgat
tctgctaacagtaactcggtttcagaggcatcttcaaatgagagccaagcgttgtatatg
gatgcagagcgtctcgagagtaatgttataaccgggttccaacttgcaacttcagctggg
cctttatgcgatgaacctatgtggggtctggcatttgtcattgaggcacgaataactcca
tctacaggacatgatgaatccgaaacacaccaacaatccgaccagtatggcatctttgca
gggcaggttattgcaacagtcaaagatgcctgtaggacagctgtgctaaagaataagcca
aggcttgtggaagcaatgtacttctgtgaattgaatacccctaatgaatttttgggtccc
atgtatggtgtactttcccgcagacgggctcgaattttgaaagaagagatgcaggaaggt
tcccctttattcactgtgcatgcatatgttcctgtttctgagagctttggttttactgat
gagcttagaagtaggacttctggcgctgcgagtgcaattcttgtccttagccactgggaa
gcactactcgaagatcctttctttgtacctaaaacagaagaggaaatcgaagagcatgga
aatggttccagtgttcttccaaatacagcaagaaagttgattgacacagtcagacggcgg
aagggccttcatgtcgaggaaaaggtagtacaacacggaacaaagcagaggacactcgct
cggaaagtttga
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