Trifolium pratense (red clover): 123921872
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Entry
123921872 CDS
T08949
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123921872
03036 Chromosome and associated proteins [BR:
tpra03036
]
123921872
Transcription factors [BR:
tpra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
123921872
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
123921872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
123921872
NCBI-ProteinID:
XP_045830533
LinkDB
All DBs
Position
LG4:25405508..25411441
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AA seq
648 aa
AA seq
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MTDGHLFNNITLGGRGGTNPGQIKIFSGGIFWKRQGGGKSIEVDKADIVSVTWMKVPRSN
QLGVQIKDGLFYKFTGFRDQDVLSLTNFFQNTFGITVKEKQLSVTGRNWGEVDLNGNMLV
FMVGSKQAFEVPLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDVNTSPAQVFCNNIVSVADVGAGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVDSELALS
EDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLITHEEIDFVEFERHTAGGSNMHYFDLLIRLKSDQEHLFRNIQ
RNEYHNLYGFISSKGLKIMNLGDGQAGVDKVLESDDDDAVDPHLERIRNEAGEDDSDEED
SDFVAGEYDEGSPTDDSGADDSDASQSGDEIEKPAKKEPKKDLPPSNSKASSSKKKSKDA
DEDGKKRKPKKKKDPNAPKRALSGFMFFSQMERENIKKTNPGISFIDVGRVLGEKWNKMS
VEEKEPYEAKARVDKIRYKDEISGYKNQQAQPQPQPMNIDSGNESDSP
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcatctcttcaacaatatcaccctcggcggccgcggcggcactaatccg
gggcagataaaaatattttctgggggaattttctggaaaagacaggggggtggtaaatca
attgaagttgacaaagctgacatagtgagcgtgacatggatgaaagttccaaggagcaat
caactcggtgttcagatcaaagacggtttgttctacaaattcactggatttcgtgatcag
gatgtcttaagtttgaccaatttttttcaaaacacctttggaataactgtaaaggagaag
cagctttctgttactgggcgcaattggggagaagttgatttaaatggaaatatgctggtt
ttcatggttggttcaaagcaagcttttgaggttcctttagcggatgtctcacaaacaaac
cttcaagggaaaaatgatgtgatattggagttccatgtggatgacacaactggagccaat
gagaaagattcattgatggagataagtttccatataccgaattccaacacccagtttgtt
ggtgatgtaaatacctcccctgctcaggttttctgtaataacatagtatctgtggctgat
gttggtgctggaggtgaagatgctgttgttacatttgagggtattgcaatccttacacca
aggggacgatatagtgttgagttacacctgtcattcttgcggcttcaaggacaggctaat
gattttaaaatacagtatagcagtgtggttcgactatttttacttcctaagtctaatcag
ccacataccttcgtcgttattagccttgatccacctattcggaaaggacaaactttgtac
cctcatattgtgatgcagttcgaaacagattctgtggttgatagtgaattggcattaagt
gaagatctttataactctaagtacaaagacaagttggagctgtcttataaggggcttatc
catgaagtgttcaccacaatattacgcgggttgtctggggctaaagttaccaagcctgga
aaatttaggagttgtcaagatggttacgctgtgaaatcatctctgaaagctgaggatgga
attttgtatccccttgagaagagcttcttctttctacctaaacctcccactcttattaca
cacgaagagattgactttgtggaatttgagcgacatactgctggtggttcaaatatgcat
tattttgaccttcttatcagactaaaatctgaccaggagcatctcttccgtaatattcaa
agaaatgagtaccacaatttgtacggtttcataagttcaaagggcttgaaaattatgaat
ttaggagatggccaagccggtgttgataaggttcttgagagtgatgatgatgacgctgtt
gatccccatcttgagcgcatcagaaatgaagctggcgaagatgatagtgatgaggaggat
tcagattttgttgccggagagtatgatgaagggtctcctactgacgattctggggcagat
gattctgatgctagtcaaagtggtgatgagatagagaagcctgccaaaaaggagccaaag
aaggatcttcctccttctaactctaaggcatcttcttctaagaagaaatcaaaagatgcc
gatgaggatggaaagaagagaaaaccgaagaagaaaaaggatccaaatgcacccaagagg
gcattgtctggattcatgttcttttctcaaatggaaagagagaatataaagaaaactaat
cctgggatttcatttattgatgttggaagagtacttggagagaaatggaataagatgtca
gtggaggagaaggagccatatgaggcaaaagcccgtgttgataaaatacgttacaaggat
gagattagtggctacaagaatcaacaagcacaaccacaaccacaaccgatgaatattgat
tcaggaaatgaatctgacagcccctaa
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