Trifolium pratense (red clover): 123922197
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Entry
123922197 CDS
T08949
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123922197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123922197
Membrane trafficking [BR:
tpra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123922197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
123922197
NCBI-ProteinID:
XP_045830901
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All DBs
Position
LG1:complement(1787235..1802915)
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AA seq
1113 aa
AA seq
DB search
MAAPVPPGAPRPGGSNPPPPNYVPNFRGSSDGLADNMQNLNLNRPPMTSNPVARPPPFGQ
PPPFASSGPSPPGIPASSPPFSRPGPPPGTLVRPTGPPNVVSLGRPTGPPPGQQPTPFGA
GPPPGQPSPFGSRPPPSSFSSPMGNVAPPVSGVPPPGGSPPGRPLGPPSQNFGGRPSPSP
FTSPPMSAPPGMPPTSAPSNLMNNGPPAFSAGGMPGPQRFPVGSAQQPPVGPPTMRAPPA
PAGQPQSPYNMAPPGMMQPPSSPFAAPSWQTQSQQGVPPPSVPGSAQPPRMFGMPPPLPN
QSMTTTISPAVGQTGAPMAGPSKIDPNQIPRPTPGSSVILHETRQGNQATIPPPATSDFI
VRDTGNCSPRYMKCTINQVPFTADLLTTSGMQLAMLVQPLALPHPSEEPIQVVDFGESGP
VRCSRCKAYVNPFMKFIDQGRRFICNLCGFSDETPRDYHCNLGPDGRRRDADEKPELSRG
TVEFVATKEFMVREPMPAVYFFLIDVSMNAVQTGATAAACSAISQVITDLPEGPGTQVGI
ATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLQTDVIVLLSECRQHLEVLLESIPTMF
QSNRTAESAFGAAIKAAFLAMKDTGGKLLVFQSVLPSIGIGALSTREAEGRTNISAGEKE
AHKLLQPADKTLKELAVELAEYQVCVDVFVTTQSYVDIASISTIPRTTGGQVYYYYPFSA
LSDPAKLYNDLRWNVTRPQGFEAVMRVRCSQVVCLIHFLSIPFHATYHLYNFHFIFCQGI
QVQEYYGNFCKRIPTDVDLPGIDCDKTFMVTLKHDDKLQDGSECAFQCALLYTTVYGQRR
IRVITLSLPVTSMLSNLFRAADLDTQFCCFLKQAASEIPSKPLPLVREQVTTLCINALFA
YRKFCATVSSSGQLILPEALKLLPLYTLALTKSTGLRTDGKIDERSFWINYVSSLSAPLA
IPLVYPRMLAIHDLDSKEDEESVIPSFLPLSSEHISDDGVYLLENGHDCLIYVGDSVNAD
IVRKLFGVSTVDEIPTLFVLQQYDNSLSKKLNEVVNEIRRQRFCYLRFKLCRKGDQSGML
FFSYMIEDKTAGGFSYVEFLIHVHRQIQNKMAS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctgtgcctccaggggcacctagacccggcggaagtaacccacctccccct
aattatgtccctaattttaggggttcttctgatggattagctgataatatgcaaaatttg
aatctcaatcgaccacctatgacctctaatcctgttgctagacctccacctttcggccaa
ccaccgccttttgcttcatctggtccttccccgccagggatcccggcttcctccccgcct
ttttcacgacctggtccacctccagggacactggtgaggcctactggacctccaaatgtt
gtttcccttggaaggcctactggaccacctcctggtcaacagcctacaccatttggggca
ggaccacctcctggtcaaccttcaccatttgggtcaagaccacctcctagttctttttca
tctccaatgggtaatgttgcaccaccggtttctggtgttcctccgcctggtggttctcca
cctggtcgtccacttgggcctccttcacaaaattttggtggtcgtcctagcccgagtcct
ttcacttcaccgccaatgagtgctccccctggcatgcctcctaccagtgcacccagtaac
ttgatgaataacgggccgcctgcattttctgctgggggtatgccaggccctcaacgcttt
ccggttggcagtgcgcaacaaccaccggttggacctccaacaatgagagctcctcctgct
ccggctggtcagcctcagtctccttataacatggcacctccaggaatgatgcagcctcca
agttcaccttttgcagcaccttcttggcagacacaatcccaacagggtgttccacctcct
tcagttcctggttctgcacagcctcccaggatgtttggcatgccaccaccactgccaaat
caatctatgactacaactatatcacctgcagttggtcaaactggagcccccatggcaggg
ccttccaaaattgaccccaatcaaattccaaggcccacaccagggtcttcagtgatcttg
catgaaactcgtcaaggcaaccaggcaaccatccctccgcctgctacaagtgatttcatt
gtaagagatacaggcaactgcagtccacgttacatgaagtgcacaatcaatcaggtccct
ttcactgctgatcttttgacaacgtcgggaatgcagttggctatgttagtccaacctttg
gcacttccacacccatctgaggagcccattcaagttgttgattttggagagagcggtcct
gtgcgttgctcacgttgcaaggcttatgtaaatccctttatgaaatttattgatcaggga
agacgcttcatctgcaatttgtgtggatttagtgatgaaactccacgggactaccactgc
aatttgggtccagatggtcgacgtagagatgctgacgaaaagcctgagctatctagagga
acggttgagtttgttgctactaaagaattcatggtccgtgagccaatgcccgccgtgtac
ttctttctcattgatgtatcaatgaatgcagttcaaactggtgcaacagctgcagcttgc
agtgccataagtcaagttatcacagaccttcctgaaggtcctggtacacaggtgggaatt
gcaacttttgactcaacaattcatttctacaacttgaaacgtgcgttgcagcagccgttg
atgctcattgttcctgatgtccaagatgtttatactcctttgcaaactgatgtaattgtt
ctactatctgagtgccgtcaacatttagaagtacttctcgaaagcattcctactatgttc
caaagtaatagaactgctgaatcggcctttggtgccgcaatcaaggcggctttccttgca
atgaaagacacgggaggaaagctgttggttttccagtcagtcttgccatctattggcatt
ggtgccctttctacacgtgaagcagaaggtagaacaaacatctctgcaggggaaaaggaa
gcacataaattacttcaaccggcagataaaacattgaaggaactagcagttgaacttgct
gagtaccaggtttgtgtcgatgtatttgtgactactcagagttatgtcgacattgcttcc
atatcgaccatcccacgaactacgggtggacaggtttattattattacccattctcagct
ctttctgatcctgcaaagctttacaacgatcttagatggaatgtcactaggccacaaggt
tttgaggctgtaatgcgtgtgaggtgcagtcaggtagtctgcttgattcactttctttca
ataccttttcatgcaacatatcatctctacaattttcattttatcttttgccagggcatc
caagtacaggaatattatggcaacttttgtaaacgcatcccaacagatgttgacttacct
gggattgactgtgacaaaactttcatggttactttgaaacatgatgataagttgcaggat
ggatcagaatgtgcttttcagtgtgctcttctatacacaactgtgtatggccagagaaga
atacgcgtcataaccttatctcttcctgtcacgagtatgctgagtaatctgttccgcgcg
gctgacttggatactcagttttgctgtttcttgaagcaagctgctagtgagattccttca
aagccacttcctcttgtccgggaacaagtgacaaccctttgcatcaatgcactatttgca
tatcgtaaattttgtgctacggtatcctcatctggacaacttattcttccggaggcccta
aagcttttgcccctgtacacacttgcattaactaagagtacagggttgagaacagatggg
aagatagatgaacggtcattttggataaattatgtgtcctctctctctgctccattggcg
ataccgcttgtgtatcctaggatgttggctatccatgatctcgactcaaaggaagatgaa
gaatctgttattccttccttcctacctctttctagtgaacatattagtgatgatggagta
tatcttcttgagaatggtcatgattgtttaatatatgttggagactctgtgaatgcagat
attgtacggaaactgtttggtgtttctacagttgatgaaattccaactctgtttgtattg
caacaatatgacaattcgctgtcaaagaagttaaatgaagtggtgaatgagattcggcgg
caaagattttgctacctccggtttaagctctgcaggaaaggtgatcaatcaggaatgtta
ttcttctcgtatatgatagaagacaagaccgcaggtggcttctcctatgtagagtttctt
atacatgttcataggcaaatccagaataaaatggcatcgtaa
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