Trifolium pratense (red clover): 123922339
Help
Entry
123922339 CDS
T08949
Name
(RefSeq) pectinesterase 4-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123922339
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
123922339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Csm1_B
Motif
Other DBs
NCBI-GeneID:
123922339
NCBI-ProteinID:
XP_045831021
LinkDB
All DBs
Position
LG4:24666283..24667544
Genome browser
AA seq
376 aa
AA seq
DB search
MESLNARCFYIQVLISTIATFLLVASARVNHHIVDRDGYPSWLSTSDRIVVSQLQSGGMQ
PNAIVANDGSGQYTTVTDGINSYPTNFQGTYIIYVKAGIYQEYVTVDQSKHNILLYGDGP
TKTIITGNKNKNQGLSMPETATFTTFAENFTAKYIKIENTADATGEQAVAIRVVGDRSAF
YNCAFRSHQDTLFVDNGRQFYRDCEISGTIDFIYGRSSTLIQNSQILVRKPLEGQSNVVV
ADGTSAYSRFTTGIVLQNCSILPDNEFKPYLHTTKTYLARPWGQFSTAVFLENYIADFIQ
MDGYLIWSKDQPNIENPYFAEFGNTGPGANATARVSWAKGLISKKAASIFTAEQFIHART
WLPATGIPYDHGLKST
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaatccttgaatgcacgatgcttctatattcaagttttaatttctaccattgccacc
tttctcttagtggctagtgccagggtgaatcatcacattgttgatcgtgatggataccct
tcatggttatctaccagtgatcggatagtagtatctcagcttcagagtggaggtatgcaa
ccaaatgccattgtggctaatgatggcagtggccaatataccacggtcactgacggcatc
aactcataccctacgaatttccaaggtacatacattatctacgttaaggccggaatctac
caagagtatgtgaccgttgatcagagcaaacataacattctcttgtatggcgatggacct
accaaaaccataatcaccggaaacaagaacaagaaccaaggactctcaatgccggaaact
gccacattcaccacctttgctgaaaatttcaccgccaagtacattaaaattgagaataca
gcggatgcaacaggtgagcaagcggtagctatacgagttgtaggtgatcgatcagcgttt
tataattgtgcctttcgcagtcatcaagatacattgtttgtggacaatggccgtcagttc
taccgtgactgtgagatttccggaacgattgacttcatatatggtcgttctagtacttta
atacagaactctcagattttggtgagaaagccccttgaaggacaaagcaatgttgtggtg
gctgatggcacttctgcatacagcaggttcacaactggtatagtcttgcaaaactgctct
atattgccagataatgagttcaagccttatctgcacaccacaaaaacttacttagcaaga
ccatggggtcaattttcaaccgcagttttccttgaaaactatattgctgattttattcaa
atggatggatatctgatttggagtaaagatcaaccaaacattgaaaacccttactttgct
gagtttggcaacactggacctggtgccaatgccacagcaagagttagttgggctaaaggt
ctaatcagcaagaaggcggcttctatattcacagcggaacagttcattcatgctagaact
tggttgcccgccaccggcattccctatgatcatggattgaaatcaacttaa
DBGET
integrated database retrieval system
