Trifolium pratense (red clover): 123922592
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Entry
123922592 CDS
T08949
Name
(RefSeq) PHD finger protein MALE MEIOCYTE DEATH 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123922592
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123922592
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
DinB
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
123922592
NCBI-ProteinID:
XP_045831245
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Position
LG4:36543998..36546841
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AA seq
746 aa
AA seq
DB search
MDSSSHETVISTKGKDQSWNLFNSQPQPTMSFSTIDVCKKRKRWQKIFRLQSFADPGCPI
APSGSFRENVRLFLQEAGELEDYTVMGNPLWCTFLNHEKSNLMVPFYTLEEQVYNSSHPF
CDHCRCVGWSGHFVSKRRYHFIIPMDNEWHKPLNEEALDNQNHLLHGVIHCNGYGHLICL
NGIEGGSKFLSGREIMELWDRICTNLTARQIAVEDASRKRSMDLRLLHGVAYGHSWFGRW
GYKFCRGSFGVTEENYYEAIETLGSLVLDDIVRDLSKTKYHKDIKQMIRFYRDMSETRIV
TIRELLRFMLTVKSRHTVSKITVTYSSSDAASAADSPPCSTSACMSRNSTKHALSSRSNS
MNKEKSARYKKFSTAVATMDSRWPTRRLEFAAQVIVDALKEDKAMKPGSSGMTRQDVRDA
ARVHIGDTGLLDYVLKSLNNVIVENYVVRRMVNPSSRILEYTIHELGKEFKAPEVEYSVM
TLVDNPQVESSTPSSSSSLSLVPGNDVYSDVVYLYKNVLLGYPDSEPVELAVQTILHCRH
FVKEWKLRDEMEQVLTFICRLKPNFIENKSDFKGPSCGEIVTVPLHATVKDLKQAAEAAL
RDTYCIAERLIVTDIKELMDADDEEVIFGQIESGVKLCVRGIGIDLYTPLKYQGGSDNWK
VRCECGAQDDDGERMIACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDSLVPPRIESSR
YGMVDCADAFLVSAEAAHLLEYGYGY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcatcacatgaaactgtgatttctacaaagggaaaagatcaaagttggaat
cttttcaattctcaaccacaacccaccatgtcattctcgacgatcgatgtttgcaagaag
cggaaacgatggcagaagatttttaggttacaatctttcgctgatcctggttgtccaatt
gcaccttcaggttctttccgtgaaaatgttcgattgtttcttcaagaagctggtgaactt
gaagattatacggttatgggaaatcctctttggtgcacttttctgaatcatgaaaagtca
aatcttatggttcctttctatactcttgaagaacaagtttataattcttctcatcctttc
tgtgatcattgccgttgtgtaggttggagtggacattttgtatcaaagagaaggtaccat
ttcataattccaatggataatgagtggcataagcccttaaatgaagaagctcttgataat
cagaatcatctgttacatggtgtgattcactgcaatggttatggccatttgatatgtctt
aatggcattgaaggtggctccaaatttctcagtggtagagaaatcatggaactatgggat
agaatttgcaccaatcttacagcaaggcaaattgcagtggaagatgcttcaaggaaaaga
tcaatggatcttagattacttcatggagttgcttatggtcactcttggtttggtaggtgg
ggctataagttctgtcgtggaagctttggtgtgacagaagaaaactactatgaagcaatt
gaaactcttggttcattagttcttgatgatattgtaagagatttgagtaagacaaagtat
cataaagatatcaaacaaatgattcgtttctatagagatatgagtgaaactcgtatagtc
acaataagggagcttcttagattcatgcttactgtcaagtctcgtcatactgtatcgaag
ataacagtcacttattcttcttctgacgctgcttctgctgctgattcacctccttgttct
acttcagcatgtatgtcaagaaattcgaccaaacatgcactttcaagtagatcaaattcc
atgaataaggaaaaatcagcaaggtataagaagttcagcactgcagtggcgactatggat
agtagatggccaacaaggagactcgaattcgcagctcaagtgattgttgatgcattaaaa
gaagacaaagctatgaaaccaggctcaagtggcatgacaaggcaagatgtgagggatgca
gctagggttcacattggtgacacaggtttacttgattatgtgctgaaatcactcaacaat
gtgattgttgaaaactatgtcgttcgtcgtatggttaacccttcatcaaggatccttgag
tataccattcatgagcttggaaaagagttcaaagcacctgaagtagaatatagtgtaatg
acacttgtagataatcctcaagtggagtcatcaacaccatcatcatcatcttctttatct
ttggtgcctggtaatgatgtttacagtgatgtagtttatctctacaagaatgtgttacta
ggttatccagattcagagccagttgaattagcagttcagacaattcttcactgcagacac
tttgtgaaagagtggaaattgagagatgaaatggagcaagttttgacatttatttgccgt
ttgaaaccgaatttcatcgaaaataagtctgatttcaaagggccatcttgtggtgagatt
gtaactgttccactgcatgcaacagttaaagatttgaagcaagctgctgaggctgcatta
agggacacatattgcatagctgaaagactaattgtaactgatatcaaagaattgatggat
gcggatgatgaagaagttatttttggacagattgaatcaggtgtgaagctttgtgtgagg
ggaattggaatagatttatacacaccattgaagtatcaaggaggttctgataattggaag
gtgaggtgtgagtgtggagcacaggatgatgatggtgagagaatgattgcttgtgatatt
tgtgaggtatggcagcatacaagatgttgtggaatagatgattctgagacagttccacca
ttgtttgtttgttctggatgttgtgattcacttgtaccgccaaggatcgaatctagccgc
tatggtatggtggattgtgctgatgcttttctggtttcagctgaggctgctcatttgctt
gagtatggttatgggtattga
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