Trifolium pratense (red clover): 123922864
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Entry
123922864 CDS
T08949
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123922864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123922864
03051 Proteasome [BR:
tpra03051
]
123922864
Membrane trafficking [BR:
tpra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
123922864
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123922864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBQLN1
Rad60-SLD
UBA
UBA_7
TBK1_ULD
UBA_HOIP
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
123922864
NCBI-ProteinID:
XP_045831493
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Position
LG4:51023961..51031617
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AA seq
577 aa
AA seq
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MENNKNGSSKSMLQSNVPQSDGATDMSPTSGEGTSTKNIKMLPVSYSVLDSGCRGPLKRE
IGTIINSPNKRYREVYVIEDEEAGTSKLKGVDECVKINVRYFNGSKFSVQVALESTVESF
KELIVGNSGIPIQNQRLIYKGQILQNDRSLQSYGLGANHTVHLVRCFARTDTDDGTTSNS
EGGDLLQQGDFQPMPPPYGFVDPNSVRDLFDTPTMRYLAANPDIMWCILTTNIEELPQNE
AIDLSIVIQVLEAARNPAIMHEIMILSDLELNNFGFSPDGFNILRHIIYDATQEPNGTIM
AGNGITGISGTFDGNASDQSINTETNVSSSLPNTTPLPNPWAFPPLPNPWDFPESYFWCC
NHLISDIAVVDDQTNIWRYTTDFPGFEAMLNGSVMPNDAMQIDQYYAVVDDQTNIRRSTT
DFSGLEGILNGSVMPNDAMQTQLVQDQPIRQCIEFMPSNPEALCQFDGDNIEQHVMPDLS
SLREEIQNPEFLRLQTPLSFWEEDLPPELSQQQSMQELSQTTGDTDMQETAEQLYASQLS
QLQDMGFNDREENIRALILTSGDVHAAVRHLWWLSHQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacaaaaatggttcctctaaatctatgttacaatccaatgtccctcagagt
gatggtgccacagatatgagtcctacaagtggagaaggtacaagcacaaagaatattaaa
atgttgcctgtgagttattcagttttggattctggttgtcggggtccccttaagagagaa
attggaactatcatcaacagtccgaacaaaagatatcgtgaagtttatgtgattgaagat
gaagaagctggtacatccaaattgaagggcgttgatgaatgtgtaaaaatcaacgttcgt
tacttcaacggttcaaagttttctgttcaagttgcactcgaatccacagttgaatccttc
aaggagcttatcgttggaaacagtggcatccccattcaaaaccagcgactcatttacaag
ggtcaaatcttgcagaatgatcgatctcttcaaagctatggtttgggggcaaatcatact
gtccatctggttcgttgctttgcacgcaccgatacagatgatgggacgaccagcaatagt
gaggggggtgacttacttcaacaaggagattttcaaccaatgccgccaccatatggtttc
gttgatcccaattcagtcagagatttgttcgatacaccgactatgcggtacctggcagct
aaccctgacataatgtggtgtattttaacgaccaatattgaagaattaccacaaaacgag
gctattgatctcagcattgtgatccaggttcttgaagctgcaaggaatcctgcaatcatg
cacgaaattatgatactatcagacctcgaacttaacaactttggattttctcccgatgga
ttcaacatattgaggcacattatttatgacgcaactcaagaaccaaatggcactataatg
gctggtaatggtattacaggaatttccgggacttttgacggcaatgccagcgatcaatca
attaatactgaaacaaatgtcagttcttccttacccaatactaccccacttcccaatcct
tgggcttttccaccacttcccaatccttgggattttccagaatcttatttttggtgttgt
aatcacttgatatcagacattgcagttgtagatgaccagactaatatctggagatacacc
actgattttccgggcttcgaagccatgttgaatggaagtgttatgccaaatgatgctatg
cagattgatcaatactatgcagttgtagatgatcagactaatatcagaagatcaaccact
gatttttcgggccttgaaggcatattgaatggaagtgttatgccgaatgatgctatgcag
acccaattagtgcaagatcaaccaatccgacagtgcatagaatttatgccttccaaccca
gaagctttgtgccagtttgatggtgataatattgaacaacatgtcatgcctgatttaagt
tccctcagagaagagattcaaaatccggagtttcttcgtttgcagaccccattgtctttc
tgggaagaagatcttccacctgagcttagtcagcaacaatcaatgcaggaactgagtcag
acaactggagacactgatatgcaagagacagcagaacaattgtatgccagtcaactttca
cagcttcaagatatgggattcaatgacagagaggaaaacataagagctcttattctcact
tcaggggatgttcatgcagcggttcgacatctttggtggctctcacatcagtag
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