Trifolium pratense (red clover): 123923207
Help
Entry
123923207 CDS
T08949
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00240
Pyrimidine metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
123923207
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
123923207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
123923207
NCBI-ProteinID:
XP_045831840
LinkDB
All DBs
Position
LG4:complement(10506900..10513178)
Genome browser
AA seq
347 aa
AA seq
DB search
MASSAALRITNLRRHLDSADTVNKPTGVNPAGASINVKVASEVSEALSLGRAVVALESTI
ISHGMPYPQNLRTAKEVESIVRENGAVPATIAILDGVPCIGLSAEELERLATLGTKAQKT
ARRDIAYVVARGGNGATTVSATMFLASKVGINVFVTGGIGGVHRHGESTMDISSDITALG
RTPIAVICAGVKSILDIPRTLEYLETQGVFVAAYKTNEFPAFFTASSGCKVPCRVDTPED
CASLIEANIKLKLESGILIGVPIPQEHSATGHVIESAINQALNEAREKNISGNAQTPFLL
ARVNELTGGASLASNIALVKNNACIGAKVAVALAQLRENSKRKQEME
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcagcagccttgaggataaccaatcttcgaagacacttggattcagctgac
acagtcaacaagcctaccggagtcaatcctgctggtgcatcaatcaacgtgaaggtagct
tcagaggtttctgaagcgttatcactagggcgtgcagttgttgctctggaatctaccatt
atttcacatgggatgccgtatcctcaaaatttgcgaacggcaaaagaggttgaaagtatt
gtgagagagaatggtgcagttcctgcaactattgcaattttggacggcgtgccttgcata
ggtctaagtgcggaagaacttgaaaggttagctactttgggaaccaaagctcagaaaaca
gctcgaagggatatagcatatgttgtggctagaggtggaaatggtgctactactgtttct
gctacaatgtttttggcttctaaggttggtatcaatgtctttgtgactggtgggattgga
ggagtgcacaggcacggggaatcgactatggatatatcttcagatataactgcgcttgga
agaacaccaatagccgttatatgtgctggtgtgaagtcaatattggatattcccaggacc
cttgaatatctggaaacgcaaggagtttttgttgctgcttacaagaccaacgagtttcct
gcctttttcacagcatcaagtggctgcaaggtaccctgtcgggttgatacccccgaagac
tgtgcttccttaatagaagcaaacatcaaactcaagcttgaaagtggaattttgatagga
gtccctattcctcaagaacactcggctactggacacgtaattgaatctgccatcaatcaa
gcccttaacgaagcaagggaaaagaatatatcaggaaatgctcagactcctttcttgctt
gctagagtaaatgaacttaccggaggtgcctcacttgcttcaaacattgctcttgtgaag
aacaatgcctgtattggggctaaagttgctgtagcccttgctcagctaagagaaaacagt
aaaaggaaacaagagatggagtag
DBGET
integrated database retrieval system
