Trifolium pratense (red clover): 123923268
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Entry
123923268 CDS
T08949
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123923268
04121 Ubiquitin system [BR:
tpra04121
]
123923268
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
90S particles
Other 90S particles
123923268
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123923268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
Beta-prop_Vps41
VID27
PROPPIN
Motif
Other DBs
NCBI-GeneID:
123923268
NCBI-ProteinID:
XP_045831915
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All DBs
Position
LG4:34824066..34829625
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AA seq
451 aa
AA seq
DB search
MKLKVISRSADEFTRERSQDLQRVFHNYDPKLRPQEKAVEYTRALNAVKLDKIFARPFVA
AMDGHIDAISCMAKNPSQLKEIFSGSMDGDIRLWDIAARRTICQFPGHRGAVRGLTVSTD
GRILVSCGTDSTVRLWNVPVSSFVDPYSSIKQTEPTSVYVWKNAFCAADHQWDGEHFATG
GAQVDIWNHNRSQPVNSFVWGSDTVISVRFNPGEPNLLASSASDRSINLYDLRMDSPVRK
MIMQTKTNSIAWNPMEPINFTVANEDGYCYSYDSRKLGEAKCVHQDHVSAVLDIDYSPTG
REFVTGSYDRSVRIFPYNGGHMREIYHTKRMQRVFCVKFSGDGSYVISGSDDTNLRLWKA
NASEQLGVILPREKKKHQYHEAIKKRYKHLPEINRIARHKHLPRSIFKAAKLMHIMADSR
KRKQERKKAHSAPGSVTTTPLRKRRILKEVE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaagttatatcacgctctgcagatgagttcactcgagaacgaagccaagac
cttcagcgtgtgtttcataattatgaccctaaacttcgtcctcaagagaaggcagtggag
tatactcgtgctctcaatgcagtgaagctcgacaaaatttttgcaagaccttttgtagca
gcaatggatggacatatagatgctatttcgtgtatggcgaaaaaccctagtcagttgaaa
gagatattctctggttcaatggatggagatattcgtctttgggatatagctgctagacgg
accatttgtcagttccctggtcaccgaggtgccgtgcgaggcttgacagtatctactgat
ggacgcattcttgtttcatgtggaactgattccactgtcagactttggaatgttcccgtt
tcttcttttgtggacccatatagctcaattaagcaaactgagccgacaagtgtttatgtt
tggaagaatgcattctgtgctgctgatcaccagtgggatggcgagcattttgccacaggt
ggcgcgcaagtagatatatggaatcataacaggtctcagccggtaaatagttttgtatgg
ggatcagatacggtgatttctgtccgctttaatccgggagaaccaaatcttttggcaagc
tcagctagtgacaggagcataaatctgtatgatttgcgcatggattcccctgttaggaaa
atgataatgcagaccaaaaccaattctatagcttggaatccgatggaacccataaatttt
acagttgcaaatgaagatggttactgctatagttatgattctaggaaattgggcgaagcc
aaatgtgttcatcaagatcatgtttctgctgtgttggatattgactactcaccaacaggc
cgtgaatttgttaccggatcttatgatagatcagtgagaatcttcccttataatggtggt
cacatgcgagagatttaccatactaaaagaatgcaaagggtattctgtgtcaagttcagc
ggtgatggaagttatgtgatttcgggaagtgatgatactaacctcaggctttggaaagcc
aatgcatcagaacaacttggagtaattctcccaagggaaaagaagaaacaccaatatcac
gaggccataaagaaacgctacaaacaccttcctgaaattaaccgtattgcaaggcataaa
cacttaccaagatcgatattcaaagctgctaagcttatgcatattatggccgattctagg
aaaagaaagcaagagagaaagaaagctcacagtgccccaggaagtgttacaacaacgcca
ttacgtaaaagaagaattctcaaagaagttgagtga
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