Trifolium pratense (red clover): 123923311
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Entry
123923311 CDS
T08949
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123923311
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123923311
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
123923311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4
Peroxin-3
Baculo_PEP_C
Adenyl_transf
SF-assemblin
zf-C3HC4_3
zf-C3HC4_2
DUF7809
DUF6270
Prok-RING_4
RING_XB3-XBAT31
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123923311
NCBI-ProteinID:
XP_045831952
LinkDB
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Position
LG4:complement(55077932..55081932)
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AA seq
387 aa
AA seq
DB search
MELSSVKDAFDRVSKKQKLSSSKTQEMFDQIRQEIEGVLDKMQSANNTDQVLDYKTVLNE
LKDSVLKIAPLGQMESTQKEFNVALSKYGKHLEKYFTPDISKAYRNIDFDIHTLNQIIAN
HFYRQGLFDVGDHFLNAVGEPESAAIMKSPFLEMYQILQAMENQNLEPALNWASTNSDKL
AQSGSDIVLKLHSMQFIKILQNGGGRDEALHYARTHISPFATSHIADVQKLMTCLLWPGK
LEKSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTVAAGIQVLPALLKFMNVMA
GKKQEWQSMNHLPVPIEMDKEFQFHSIFVCPVSKEQATEENPPMLMSCGHVLCKQSILKM
SKNSTKVFKCPYCPFDIDAAQCKQLYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagctaagttctgttaaagatgcttttgaccgagtttctaagaagcaaaagttatcc
agttctaagactcaagagatgtttgatcagatcagacaagaaattgagggtgttttagac
aaaatgcagtcagccaataacactgaccaagtgcttgattataaaactgtcctgaatgag
ctgaaggatagtgtacttaaaattgctccacttggccaaatggaaagtacacagaaggag
ttcaatgtagcactcagcaagtacgggaagcatcttgagaaatatttcacccctgatata
tcaaaagcttacagaaacatcgactttgatatacacactttaaatcaaattattgccaac
catttttatcgccagggcctttttgatgtaggggaccattttttaaatgcagtcggagag
cctgaatctgctgcaattatgaaatctccattcttggaaatgtatcaaatactccaagcc
atggagaatcagaacttggaaccagccctcaactgggcttccactaattctgacaaactt
gctcaaagtggatctgacattgtgttgaaacttcactcgatgcaatttataaaaatactt
caaaatggtggaggtagagatgaagctcttcattatgcaagaactcacatttctcctttt
gctaccagtcatattgccgatgtccagaaacttatgacttgtcttctttggcctggaaag
cttgaaaagtctccataccatgcattactttccccatctaactgggatagattggctgag
gaacttaaaagacagttctgcaatcttttgggacaatcatacaacagtccgctgagtgtg
acagtagcagcagggatccaggttttgccagctctccttaaatttatgaatgtcatggca
ggaaagaagcaggaatggcagtctatgaaccacttaccagtgccgatcgagatggacaag
gaatttcagtttcattcaatttttgtttgccctgtctcaaaggaacaagcaaccgaggaa
aaccctccaatgttgatgtcctgtggccatgtcctctgtaagcaatctatcttgaaaatg
tctaagaatagcacaaaagtttttaagtgcccgtactgtccctttgatattgatgcagca
cagtgcaagcaactatatttgtga
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