KEGG   Trifolium pratense (red clover): 123923349
Entry
123923349         CDS       T08949                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03083  Polycomb repressive complex
tpra04120  Ubiquitin mediated proteolysis
tpra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123923349
   04120 Ubiquitin mediated proteolysis
    123923349
  09126 Chromosome
   03083 Polycomb repressive complex
    123923349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tpra04131]
    123923349
   04121 Ubiquitin system [BR:tpra04121]
    123923349
   03036 Chromosome and associated proteins [BR:tpra03036]
    123923349
Membrane trafficking [BR:tpra04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    123923349
Ubiquitin system [BR:tpra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     123923349
   Cul7 complex
     123923349
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     123923349
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     123923349
SSDB
Motif
Pfam: Skp1_POZ Skp1 DarP Picorna_P3A
Other DBs
NCBI-GeneID: 123923349
NCBI-ProteinID: XP_045831993
LinkDB
Position
LG4:7246207..7246683
AA seq 158 aa
MSSSTKKITLKCRDGETFEIDEVVALESQTIKHMIEDDCADSGIPLPNVDGKILAKVIEY
CKKHVQGASSEEEKPISNDDLKAWDDDFVKVDQCTLFELILAANYLDIKSLLDCLCQAAA
DMIKDKTPEEVRKIFNIENDFHPEEEAEVRRENQWAFD
NT seq 477 nt   +upstreamnt  +downstreamnt
atgtcatcatcaacgaagaagatcaccctgaagtgtcgtgatggtgaaacatttgagatc
gacgaggtggttgcgttggaatcacaaacaatcaagcatatgatcgaggacgattgtgct
gacagtggaatccctcttccgaatgtagacggcaagattttggcgaaggttattgaatat
tgcaaaaaacatgttcaaggtgccagttctgaagaagaaaaacctattagtaacgatgat
cttaaagcatgggacgatgatttcgtcaaagttgatcagtgtacactcttcgaactcatt
ctggctgcaaattatttggacatcaagagtttgttggattgtttatgtcaggctgcagca
gacatgatcaaggataagacaccggaggaggttcgcaagattttcaacatagagaatgac
ttccatccggaggaagaggcggaagttcgtcgggaaaatcaatgggcttttgattga

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