Trifolium pratense (red clover): 123923458
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Entry
123923458 CDS
T08949
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123923458
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
123923458
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
123923458
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
123923458
NCBI-ProteinID:
XP_045832101
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Position
LG4:49822360..49828755
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AA seq
613 aa
AA seq
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MKIVTYNVNGLRQRITQFGSLRNLLHSFDADIICFQETKLSRQDVTADLVMADGYESFFS
CTRTSKKGRTGYSGVITFCRVRSAFSSNEAALPLAAEEGFTGLMRDSQTSEDKLPLFMEE
DLGDYSKDELLSVDSEGRCIVTDHGHFVLFNIYGPRAGGDDTERIQFKQKFYRILQKRLE
SLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFDKNEFRRWFKSMLIENGGHFSDVFRAKHP
DKRDEYTCWSQSSGAEVFNYGSRIDHILCAGSCLHKSDDLQCHSFIRCHVKECEILTQYK
RFKPESTLSGHRWKGGQSIKLEGSDHAPVFVTLMEIPEIPLHSTPSLSARYVPMVRGVQQ
TLVSLLMKRRVSESCKMTHRDISMVSTCEKIEEPVDIIGSSTSESDFLPNKDLGGSIVEP
NALSTGSSQETVSKSGSVYEKSTIRKCNESKKKARKSQSSQLSLRSFFQKSKNLDNGVKD
SCTGFSSNQAEPSQPNSQLLETSTVFDNSSDHVQDEVNTDVCDQDLAELNDSSRKEEKSI
VASQEWQRIQKIMQSSIPLCKGHKEPCIPRVVKKQGANFGRRFYVCARAEGPASNPEANC
GYFKWATSKSRNK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacttacaacgtcaatggtttgcgacaacgcataacacagttcggttct
ctccgcaatcttcttcattcattcgacgccgatattatttgctttcaggagacaaaactc
agtaggcaagatgtaactgcggatttggttatggcagatggatacgaatcgttcttttct
tgtacccgaacttccaagaaaggccgaaccggttattccggtgttattacattttgtcgt
gtaaggtctgctttttcgagtaacgaagcagcattgcccttggcagccgaggaaggattc
acaggcttaatgcgtgactctcaaactagtgaagacaaattgccattatttatggaagaa
gatctgggggattattcaaaagatgagcttctcagtgttgatagtgaagggcgatgcatt
gtcactgatcatggtcactttgttcttttcaatatttatgggcctcgagctggaggcgat
gacaccgagaggattcagtttaaacaaaaattctacaggatactgcagaaaagattagag
tctctcctgcatcaaggaaggagaatatttgttgttggtgatctcaatattgcaccattt
gcaattgatcggtgtgatgcaggacctgattttgacaagaatgagtttagaagatggttc
aaatcgatgttaattgaaaatggaggccacttttctgatgtctttcgggcaaagcatcct
gataaaagggatgaatacacttgttggtcgcaaagttcaggtgctgaagtgtttaactat
gggagtagaatcgaccatattctatgtgctggttcttgcttacataaatcagatgacctg
caatgccatagttttataagatgccatgttaaggaatgtgaaattctgactcagtacaaa
cggttcaaacctgaaagtacactgagtggccacaggtggaagggaggacagagcattaaa
cttgaaggatctgatcatgctccagtttttgtgactttaatggaaattccggagatccct
cttcatagtacgccatctttatctgctagatatgttcccatggtccgtggcgtacaacaa
actctagtgtcattgttgatgaaaagacgagtttctgaatcgtgcaagatgacacacaga
gacatttcaatggtcagtacttgcgagaaaatagaagaaccagttgacataattggttca
tctacctccgaatcggattttcttccaaacaaggatttaggaggtagcattgtggaacca
aatgcactttccacaggttcttctcaggagactgtttctaaatcaggaagtgtatatgaa
aaatcaacaattcggaaatgcaacgagtccaagaaaaaagctagaaagagtcaatcgtcc
cagctctctcttaggtcattttttcagaaaagcaaaaatcttgacaatggtgtcaaggac
tcttgtactggtttctcaagtaaccaagcagaaccctcacaacctaactcccaattactt
gaaacttctacagtgtttgataatagtagtgatcatgtgcaagatgaggtgaatactgat
gtgtgtgatcaggatttagctgaactaaatgatagttctagaaaggaagaaaaaagtatt
gtagcttcacaagagtggcaaagaatacaaaaaattatgcagagcagtatacctctttgc
aaaggacataaggaaccttgtatacctcgggtggtaaagaaacaaggagctaattttggt
cgcagattttatgtttgtgctcgtgctgagggccctgcatctaatcctgaagcaaactgt
ggctactttaaatgggctacttcaaagtccaggaacaagtaa
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