Trifolium pratense (red clover): 123923531
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Entry
123923531 CDS
T08949
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123923531
04121 Ubiquitin system [BR:
tpra04121
]
123923531
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123923531
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123923531
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123923531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
123923531
NCBI-ProteinID:
XP_045832174
LinkDB
All DBs
Position
LG4:complement(40286714..40289527)
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AA seq
326 aa
AA seq
DB search
MSSGATHWCYECSRPIVLEGRDAVCPYCDDGFVQELDEMRGIAPQNTLPSRSAELHQMPD
LFDALHAFVGNRGSENRFGLMDAVDNFMRHRMAGMHPNFDVRGRTSSSVPVPEQSWGVYS
SGPFLVFHGQVPGLNLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPAARS
SIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSDCIVPWLVEHNSCPV
CRVELPPHGQVSSRASSRSNNSGNGSSRGRESDRPNNGRRNPFSFLWPFRSSSSNNNQYS
DTGGSSSSTNADQNNGTSYHGWHYDN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggagcaacacactggtgttatgaatgcagtcggccaattgtgcttgaaggg
agagacgccgtttgcccttactgtgacgatggatttgtacaagaacttgatgagatgaga
ggcattgcacctcaaaatacccttccgtcacgctcggcagagcttcatcaaatgcctgat
ttatttgatgctctacatgcttttgtggggaacagaggttccgaaaacaggtttgggctt
atggacgctgttgataatttcatgaggcatagaatggctggaatgcacccaaactttgat
gttagagggaggaccagttcttctgtcccggttcctgaacagagttggggtgtttatagt
tctggtccttttttagtatttcatggccaagttcctggattaaacttgcctaatggaagc
ccaagaggtggtccaaggcgtggtgattttggtgactactttatgggttctggacttgaa
gagcttattgaacaactcaccatgaatgatcggcgtggtcctcccccagctgcacggtct
tcaattgatgcaatgcctactattaggatcacacaggcacatcttcgctccgattcacat
tgtccagtttgtaaagaaaaatttgaacttggttctgaagccagagagatgccatgtgac
catatttaccattccgactgtattgttccttggttggttgagcataactcgtgccctgtt
tgccgtgttgagctgccaccacacggacaagttagttctcgtgcaagtagtcgaagcaac
aacagtggaaatggtagctcaaggggaagggagagtgaccgtccaaacaatggaaggaga
aatccattttcgtttctgtggccgttccgctcttctagttcaaacaataatcaatattct
gatactggaggaagcagctcttcaaccaatgctgaccagaataacggaacaagttatcat
ggatggcactacgataactaa
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