KEGG   Trifolium pratense (red clover): 123923582
Entry
123923582         CDS       T08949                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03030  DNA replication
tpra03410  Base excision repair
tpra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123923582
   03410 Base excision repair
    123923582
   03420 Nucleotide excision repair
    123923582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpra03032]
    123923582
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123923582
Enzymes [BR:tpra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     123923582
DNA replication proteins [BR:tpra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    123923582
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      123923582
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 123923582
NCBI-ProteinID: XP_045832233
LinkDB
Position
LG4:complement(15425893..15451736)
AA seq 2206 aa
MNSDGRKWDRKDNRISKKQKLINTAEEELEAKLGFDIFSEGEKRLGWLLTFSSSSYEDED
TRKAYSCVDLYFVTQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYESQIADIKIV
EKEDLDLKNHLSGLRKSYLKLSFDTVQQLMTVRNDLMHVVERNKAKSDAAEAYESILTGR
REQKLQDFLDCIIDLREYDVPYHVRFAIDNDIRCGLWYDVGVSNDGVTLERRTDLLQRAE
VRVCAFDIETTKLPLKFPDADYDSIMMISYMVDRQGYLIINRECVGDDIEDLEFTPKPEF
EGYFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAHHGLKMSDELG
FQCDMNQGECRAKFAPHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPEEVNPEDMVRF
AKEKPQMMASYSVSDAVSTYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QSYKANVICPNKHQSDAEKFYKNHLLESETYIGGHVECLESGVFRSDIPCSFSLEPSAFE
QLINNLDRDLQYAIRVEGKMDLDSVSNYDEVKNSIMEKLVKLRDAPIRDECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGSTFTAKKSDYYHLKK
QIESEFVDGTNERSSKSFLDLPKVEQQTRLKDRLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCAL
PGSFPENFTFKTIDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPNRKTYTTHSECSI
EFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKVFQAEL
FENFLHGSTLKECYSEVAYVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGQQ
KSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFQTDAEVMKFY
VRKWCKVSSDVGIRSIIDWSYYKQRLGSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKV
REKEDKFRQRKIDDTFKSMNKNESTKKHNDSNGMEDEIVNDMEDFGNRGRSSTSGPRPII
RHYKANHEQHSEKFNGQEDTEKHIGSSNIDQPLSVSQQDEICENVDRIVDYQGWLQIKKR
KWKSMLGKRKKQRLENSKRSDHLNGSLEQSNGKMNHGKTNVSSYFRRNEVVLTRCHWQII
QLVHSSQVGQFFAWVVVDGIMLKIPISVPRVFYLNSRSQNEEFSGKRVNKTLPHGRHSYN
LYEVTINEEQYKEESKKLAALLADPDVEGIYETKVPLDFNAIVQLGCVCKVDKTGKKRSL
QEPWNLSELHMKTTTECAYLEQSISFFYLYHSISEGRAIYVGYFPGSQAITFVVVNPYQN
KDLSPMFLERQFRDACRTLSIEPPLRNNINFKVEYVALVRDAETVMQSAINDHRSEHHGP
MVAVIECPDVQLLKQGIRVLDDFPCLSIPSNARDSQYQILGWQQVAAKLGMQRCAASVQW
LTERIALSRYAHVPLGNFEFDWLMFTVDTFFSRALRDNQQVLWISNDGFPDLGGNNGEEN
CFLDEVHQSVCTFPGAYRKVTVELKIHHLAVDALLKCNQVNEMEGGALLGLDHEFDSEAF
PVNGQNGFDESTSCTYAFRVLKHLIQRCLSDAVTSGNVFADAILQHLYRWLCSPQSKLHD
PALHQLLHKVMHKVFALLLAEFRKLGATIVFANFSKIIIDTGKFDLSTAKAYCDSLLRTI
QSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMDDESQVDIISSWNIAEYLPKK
IQDHYVFIVSQFMYIPWNYARKQAAIRASVLSGDSCTPSINIGAAEAFESEITEYIKEQI
SSYFTDKLLGVVRDIVLHMKGMGRSENDPSTSSGLPQLAGDLHRGDAALEFIKHVCAVLA
LDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHDPCHSFTLPNVICSYCNDCRDLDLCRDP
TLLTEEWHCAVPQCGQPYDREVMENALLQIARQRERQYHLQDLVCVRCNQVKAAHLAEQC
ACAGSFKCKEDATEFRKKMHVIFNIASRQKFQLLQECTSWMLELNI
NT seq 6621 nt   +upstreamnt  +downstreamnt
atgaactccgatggccggaaatgggaccggaaagacaaccgaatttccaagaagcagaaa
ctaatcaacaccgccgaagaagaactcgaagcaaaactagggtttgatattttctcagaa
ggagaaaaacgacttggatggttactcactttttcatcctcgtcttatgaggatgaggat
acccgcaaagcctatagctgcgttgatctttactttgtcacacaggatgggtcctcattc
aagacaaaatacagatttcgcccttatttctacgtagctacaaagaataaaatggagatg
gatgttgacgcatacctgagacgacgttatgaaagccagattgcagatattaaaatcgta
gaaaaggaagatctggatcttaaaaaccatttgtctggattgagaaagtcttatttaaag
ctttcatttgatactgtgcaacaactgatgactgtgaggaatgacctgatgcatgttgtt
gaaagaaacaaggcgaagtctgatgctgcagaagcctatgagtccatattaacggggaga
agagaacagaaacttcaagactttttagattgcataattgatcttcgtgaatatgatgtt
ccttaccatgttcgctttgctattgacaacgatatacggtgtggtctgtggtatgatgtt
ggcgtgtccaatgacggggttacacttgagaggagaacagatcttctgcagcgtgctgaa
gttcgtgtttgtgcatttgatattgaaaccacaaaacttccattgaagtttcctgatgct
gactatgattcaattatgatgatttcatatatggtagataggcaagggtatttaatcata
aatagagagtgtgttggggatgatatagaggatttagagttcactccgaaaccagagttt
gaagggtatttcaaagtgacaaatgttcaaaatgagattgagcttcttagattgtggttt
tcgcatatgcaagaggtgaaacctggcatttatgtgacttataacggtgatttctttgat
tggccattcctggaacgacgggcagcccatcacgggttgaaaatgagtgatgaactgggg
tttcaatgtgacatgaatcaaggggaatgtcgtgctaaatttgctccccatttagattgt
tttgcatgggttaaacgtgacagttatcttcctcaggggagccaaggcctcaaggctgta
acaaaagccaagttaggttatgatccagaggaggtgaaccctgaggacatggtacgattt
gcaaaggaaaaacctcagatgatggcttcctattctgtttctgatgcagtgtcaacatat
tacctatatacaacttatgttcatccctttattttctctcttgccactatcatacccatg
tcaccagatgaggttttgcgtaaaggcagtgggaccctctgcgaaatgttgcttatggtt
cagtcatacaaggctaatgtcatctgccctaacaagcaccaatctgatgcggaaaagttt
tataagaatcatcttcttgagagtgagacgtacataggtggccatgttgaatgcctagaa
agtggtgtatttagatctgatattccatgtagtttttcactcgagccatctgcctttgag
caattgatcaacaaccttgatcgagatctacaatatgctataagagtagagggtaagatg
gatttggattctgtctcaaactatgatgaagtgaagaattctatcatggaaaagcttgta
aaattacgagatgccccaatacgtgacgaatgcccactcatttatcatttggatgtagct
gcaatgtatccaaatataattttaacaaaccgacttcagcctccatcaattgttacagat
gaaatttgcactgcatgtgactttaaccgtccaggaaagacttgtctacgcaagcttgag
tgggtttggcgtggatcaacattcacggcaaagaaaagtgactattatcatctaaagaag
caaattgagtcagagtttgttgatgggacaaatgaaaggtcatcaaaatcttttcttgac
ctgcccaaggtcgagcaacaaacaagactgaaagatcgtttaaagaaatactgccaaaag
gcatataaacgggtacttgacaagccagttaccgaactccgtgaagctggaatctgcatg
cgcgaaaatccattttatgttgacactgttcgcagtttccgggataggaggtatgaatat
aaaggccttaacaaggtttggaagggaaaactatcagaggctaaagccagtggaaattct
atgaagatccaggaagcacaagacatggtagtgctttatgattctttgcaacttgctcac
aagtgtattcttaattccttttatggatacgtaatgcgcaagggtgcaagatggtactcc
atggaaatggctggtgttgtcacatatactggtgcaaaaataattcaaaatgctcgcttg
ctggtagagaaaataggaaaaccacttgaacttgacaccgatggtatctggtgtgcactt
cctggatcgtttccagaaaatttcacttttaaaacaatagactcaaaaaggaagttgaca
atctcatacccttgtgttatgcttaatgttgacgtggcaataaataatacaaacgatcag
taccagacactcacagatccaaataggaaaacttatacaactcatagtgaatgctctatt
gaatttgaggtggatggaccatacaaggcaatgatcatacctgcttccaaggaggaagga
attttaattaagaagcgatatgctgtttttaatgatgatggatcccttgcggagctgaaa
ggttttgagatcaagcgcagaggtgaactgaagctaatcaaagttttccaggccgagctt
tttgagaactttctccatggctcaaccttgaaggaatgctattcagaagttgcttatgtg
gcaaaccgctggctcgatcttcttgataaccaaggaaaggatattgcagatagtgagttg
cttgattatatatcagaatcaagtaccatgagcaagtctttagctgattatggtcagcag
aagtcttgtgctgttaccaccgctaaacgtcttgctgactttcttggtgatacaatggtc
aaagataaaggtcttcgatgtcagtacatagtagcaagtgaacctaagggaacacctgta
agtgagcgtgctgttcctgtggcaatatttcaaactgatgctgaagtaatgaagttctat
gtccgaaaatggtgcaaggtctcatcagatgttggcattcgctctataattgactggtcc
tattacaagcagcggcttggttctgcaattcagaaaattatcactattcctgctgcaatg
caaaaggttgcaaatcctgtccctagggttgttcatcctgattggttgcataagaaggtc
cgtgagaaggaggacaagtttcgccaaagaaaaatagatgatacctttaagtcaatgaac
aagaatgagagcacaaaaaagcataatgattctaatggcatggaggatgagattgttaat
gacatggaggactttggaaacagggggaggagttctacatctggacctagaccaattata
cggcattacaaagctaaccatgaacaacattcagagaagttcaatggtcaagaagataca
gagaagcatattggcagtagcaacatagatcagccactttcagtgtcacaacaagatgaa
atatgcgaaaatgttgatagaattgtagattatcaaggatggcttcaaataaaaaagaga
aagtggaaaagtatgctgggaaagagaaagaagcaaagattggagaattcaaagagatct
gatcatttaaatggcagtcttgaacaatctaatggtaagatgaatcacggcaaaactaat
gtcagttcatattttagaaggaacgaggtagtcctaacacggtgccactggcagataata
cagctagtccacagttcacaagttggccaattttttgcttgggtggttgttgatgggatt
atgctcaagattcctatttctgttcctagagtcttttaccttaactccagatcacaaaat
gaagagttttctggcaaacgtgtcaacaagactcttcctcatggaagacatagttataat
ctgtatgaggtcacaattaatgaagagcaatataaagaagaaagcaaaaaacttgccgct
cttctagcagatcctgatgttgagggaatatatgaaaccaaggtgccactggattttaac
gctatagtccagcttggttgtgtttgtaaggtggataaaactggtaaaaagcgtagccta
caagagccatggaatttgagtgaattgcacatgaagacaacgacagaatgtgcttatctt
gaacaatcaatatcttttttttacttataccatagcatctcagagggacgagctatatat
gttggatattttcccgggtcacaagcaataacttttgtggtagttaatccctaccaaaac
aaggacttatcaccaatgtttctcgaaagacaatttcgtgatgcgtgcagaactttgtct
attgagccacctctgaggaataacattaattttaaggtggaatatgttgcacttgtcagg
gatgctgaaacagtaatgcaaagcgcaataaatgatcacaggagtgaacatcatgggcct
atggttgctgtcatcgaatgcccagatgttcaactattaaaacaaggcattcgagttcta
gatgattttccatgcctgagtattccttctaatgcacgtgatagtcaatatcagatactt
ggatggcaacaagttgctgctaaacttggaatgcaacgttgtgcggcctcggtccagtgg
ctaactgagagaattgctctatccagatatgcccatgtaccactggggaactttgaattt
gactggcttatgtttacagtggatacattcttttctagagcattgcgtgataatcaacag
gtgctttggatatctaatgatggttttccagatttgggtggcaacaatggtgaagaaaac
tgttttttagatgaggtgcaccaatctgtttgtacgtttcctggagcttatagaaaagtt
actgtggagctaaagatacaccacctggctgtagatgcccttttaaaatgcaaccaagtt
aatgaaatggaaggaggtgctttgttaggattggatcatgaatttgattctgaagcattt
cctgtgaatggtcagaatggctttgatgagtctacttcatgcacatatgcgtttcgagtc
ctaaaacatttgatccagcggtgcctttcagatgcagtcacatctggaaatgtttttgcc
gatgcaatattgcaacatctgtatagatggctttgcagccctcaatcaaaacttcatgat
cccgctctccaccagttactccacaaggtcatgcacaaggtcttcgcgttgttgttggca
gagttccgcaagttgggtgcaacaattgtttttgcaaacttctcgaagattattatagac
actggaaaatttgatttgtctacagccaaagcatactgtgatagtttgttaagaactata
caatctagagacctattcgagtggattgagcttgaaccactgcagttttggtgctcattg
ctattcatggaccagtataactacggtggaataccagcaaagtctgatgaagccatggat
gatgagtctcaagttgacataatatcaagttggaatattgccgaatacttgccaaaaaaa
atccaagaccattatgttttcatagtttctcaattcatgtatattccttggaactatgca
cgaaaacaagcagcaatcagggcttcagtgctgagtggagactcctgcaccccatcaatt
aatattggagcagcagaggctttcgaatcagaaataactgaatatattaaagagcagatt
agctcttacttcactgacaaactccttggagttgttcgtgatattgttcttcatatgaag
gggatgggcagatcagaaaatgatccgagtacatcatctggccttcctcaacttgcgggt
gatctccatagaggagatgcagccttggagtttatcaagcatgtctgtgccgtccttgcc
ctcgaccaaagtgtgcagcatgatgttcatgtcatgaggaaaaatttattaaaatatgtt
cgtgtcagggagtttgctccagaagcagagtttcacgatccttgtcattccttcacatta
cctaatgttatctgcagctattgtaatgactgcagagatttggacttgtgccgtgatccg
actttattgaccgaagagtggcattgtgctgtacctcagtgtggccagccttatgaccgt
gaggtgatggagaatgctcttcttcagattgcacgacaaagggagcggcaataccacttg
caagatcttgtttgtgtcaggtgcaatcaggtgaaagctgcacatttggctgagcaatgt
gcatgtgcaggctcatttaagtgcaaggaagatgcaacagaatttcgcaaaaagatgcac
gttatcttcaacatagcttctcgtcagaaatttcaacttcttcaagaatgtacctcctgg
atgttagaactcaatatttaa

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