Trifolium pratense (red clover): 123923629
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Entry
123923629 CDS
T08949
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123923629
03012 Translation factors [BR:
tpra03012
]
123923629
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123923629
Translation factors [BR:
tpra03012
]
Eukaryotic type
Initiation factors
eIF-3
123923629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
Motif
Other DBs
NCBI-GeneID:
123923629
NCBI-ProteinID:
XP_045832277
LinkDB
All DBs
Position
LG4:complement(49793971..49796651)
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AA seq
725 aa
AA seq
DB search
MADVMVMKEIEDKASRLGIDLSTINLDSIHLPPGDDDCGIIIDDEDILQEENSGSFNTGN
LGNIIVVDNLPVVPKEKFEKLKGSVRKLYSQIGVMKDDGLWMPVDRATGQSLGYCFIEYN
TSQEAELAKEKTHGYKFDRSHVLFAGSMFDDFDRAMNVPYEWAPPPYKEYTPRENLQQWL
TDAKGRDQFVMLAGNDIEVSWNDARRLKPDPVYKHGNWTESFVQWSPLGTYLATVQRQGV
VVWGGATTFNRLMHYAHPQVKLIDFSPGEKYLVTYSSHEPSNSRDANRVVINIFDVRTGK
LMRDFKGSADDFSVGGTGGVMGMSWPVFKWSGGRDDKYFARMRKNVLSVYDTETFSLVDK
KSIKVENIIDFCWSPTDPIISLFVPETGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKM
YWQSNGDYLAVIVDRYTKTKKNTCTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKG
HRFAVIHGYMPKPDISIYSMRTAQNTGRVSKLTTLKGKQANALFWSPVGRFIVLAGLKGL
NGLLEFYDVDDLETMANTEHFYATDVEWDPTGRYVATAVTHHDNMENGFNIWSFNGKHLY
RISKDSLYQLLWRPRPASFLTAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEQEKRKI
LKEDWEKWVNQWKQLHEEEMSKRQELINGKASDEEEEYEAKDIEVEEVVDVSKEILHFEY
GQELR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttatggtaatgaaagagattgaagacaaagcctcacgtctcggaatcgat
ctatctaccataaatcttgattccattcacctcccaccgggtgacgacgactgtggaatc
atcattgatgacgaggatattcttcaagaagaaaattctggttcgtttaatactggtaat
ttagggaacattatagtagtggacaatcttcccgttgttccgaaggaaaagtttgagaag
cttaaaggctctgtccggaaactttacagtcagattggtgttatgaaggatgatggtctc
tggatgccggttgatcgtgccaccggacagtccttaggttactgttttattgagtacaat
acttctcaagaagctgagcttgctaaagagaagactcatggatacaaattcgatcgttct
cacgtattatttgctgggagcatgttcgatgattttgatcgggccatgaatgtgccttat
gaatgggctcctccaccatacaaggaatatactccaagggaaaatctccaacaatggctt
actgatgctaagggcagagaccagtttgtgatgcttgctgggaatgatattgaggtttcc
tggaatgatgctcgacgattaaaacccgatcctgtttacaaacatggaaattggactgag
agttttgtacaatggtcacctttgggcacatatttggcaacagttcaacggcagggtgtg
gtagtctggggaggtgctacaactttcaatcgtctcatgcattacgctcatcctcaggta
aagcttattgacttttcacctggtgagaagtatttggtaacttatagcagccatgaaccg
agcaacagtcgagatgctaatagggttgtgataaatatatttgatgtgaggactggtaaa
ttgatgagagactttaaaggaagtgctgatgatttttctgttggaggtaccgggggtgtc
atgggaatgtcatggcctgtattcaaatggagtggcggaagagatgataagtactttgca
aggatgaggaaaaatgtactttctgtatatgatacagaaacattttctcttgttgacaaa
aaatccataaaggttgaaaatataatcgatttctgctggtcgccaactgatccaatcatt
tcactgtttgttccggagacaggaggcggtaaccagccagctagggtaagtcttgttcaa
atccccagcaaagaagaactcaggcaaaagaacctttttagtgttagtgactgcaagatg
tactggcagagcaatggggattaccttgctgttattgtagatcgatatacgaaaacaaag
aaaaacacttgcacaggctttgagcttttccgtataaaggaacgtgacataccaattgaa
gttctggagcttgagaataagaatgataagatcattgcatttgcttgggagccaaaggga
cataggtttgctgttattcatggttatatgcctaagcctgatattagtatctactctatg
cggactgctcagaacactggccgagtttcaaagctcactactctgaaaggcaagcaggca
aatgctttgttttggtcacctgtaggtcgcttcattgtactagcagggttgaaaggtttg
aacggactgttggaattttacgatgttgatgatctcgaaaccatggctaatacagaacat
ttttatgcaactgatgttgaatgggatccaactggaaggtatgttgcaactgctgtgact
catcatgataatatggaaaatggattcaacatatggtctttcaatggcaaacatctgtat
cggatatcgaaggatagcttatatcagctcttatggagaccaagaccagcatctttcttg
actgctgagaaagaggaagagattgcaaagaacttgaagaagtatagtaagaaatatgaa
gctgaagatcaagatgtttcattgctgctgagtgagcaggagcaagagaagcgcaagatc
ttgaaagaagattgggagaaatgggttaatcaatggaagcagttgcatgaagaagagatg
tcaaagaggcaagagctgattaacggcaaagctagtgacgaggaagaagaatatgaagcc
aaggacattgaagtcgaggaagtagtcgatgtttccaaagagatccttcactttgagtat
ggtcaagagttgaggtag
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