Trifolium pratense (red clover): 123923705
Help
Entry
123923705 CDS
T08949
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00061
Fatty acid biosynthesis
tpra00071
Fatty acid degradation
tpra01100
Metabolic pathways
tpra01212
Fatty acid metabolism
tpra04146
Peroxisome
Module
tpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123923705
00071 Fatty acid degradation
123923705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123923705
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpra01004
]
123923705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123923705
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123923705
Lipid biosynthesis proteins [BR:
tpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123923705
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123923705
Exosomal proteins of breast cancer cells
123923705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SpoIIM
Motif
Other DBs
NCBI-GeneID:
123923705
NCBI-ProteinID:
XP_045832382
LinkDB
All DBs
Position
LG1:34891025..34898982
Genome browser
AA seq
695 aa
AA seq
DB search
MNPYIFSVILPILATLIFRTNHPKRRGIPVTDGSGDPGVTIRNRRFDSPVETAWEGVSTL
VELFEEACRKHGERLLLGTRLIISKETETSSDGRRFEKVEYGNYEWLSYANAFEDVLRFG
SGLAALGHERNERAAIFADTREEWFLALQGCFRRNVTVVTMYASLGEEAICHSLNETEVT
TVICGKKELKTLVNISGQIDSVKRVICMDDDIPSDASSVGHGWTIISFADVKRLGKENPV
DADLPLPADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPKLGKKDVYLAYLPLA
HILELAAENLMAAVGIAIGYGSPLTLTDTSSKIKKGTKGDATVLMPTLLAAVPAILDRVR
DGVFKKVNAAGGLSKKLFYLAYERRLQAINGSWFGAWGLEKALWNFLVFSKVRAILGGRI
RFILSGGAPLSGDTQQFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSF
VKLIDWSEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTNESYKVDEKGMRWFYTGDI
GRFHTDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVDNIMLHADPFHSYCVALV
VTSQSTLEEWASKQEIPYSSFSELCSKEESVKEVHASLVKEAKKARLEKFEIPAKIKLLS
DPWTPESGLVTAALKIKREVIKKTFQEELVKLYSS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctacattttcagcgtcattctccccattctcgccacactcatcttccgaact
aaccatcccaaacgccgcggaattcccgtcactgacggaagcggcgatcccggagtcaca
attcgtaacagacgattcgattcaccggtggaaacagcatgggaaggagtaagcacttta
gtggagctattcgaagaagcttgcaggaaacatggtgagagattattgcttggaacgcgt
ttgattatatcgaaagaaacggaaacgagtagtgatggtagaagattcgagaaagttgaa
tatggaaattatgagtggttatcgtatgctaatgcttttgaagatgttttgagatttggt
agtggattggctgcattgggacatgagaggaatgaacgtgctgctatctttgctgatact
agggaagagtggttccttgctctgcagggttgtttcaggcgaaatgtaacagttgtaact
atgtacgcatcgttgggagaggaagctatatgtcactcactgaatgagacagaggttacg
acagtaatttgtgggaagaaagaattgaaaacacttgtaaatattagtggacaaatcgac
tcagtgaaacgtgtgatatgcatggatgatgatatcccatctgatgcctcatctgttgga
catggctggacaattatatcctttgctgatgttaagagacttggtaaagaaaatcctgtt
gatgctgatttacctctcccagcagatgttgcagttataatgtatacaagtggaagtacc
ggattacctaagggtgtgatgatgacacatggtaatgttttagctacactctctgctgtg
atgacaattgttcccaaacttgggaaaaaggatgtatatctagcatacttgccactggct
catatccttgaactagccgctgagaatttgatggcagctgttgggattgctataggatac
ggatctcctttgactctaacagatacatcaagcaagataaagaaaggaacaaagggggat
gctactgtgttgatgccaactttattggctgctgtacctgcaattcttgaccgcgttcgt
gatggagtgtttaagaaggtaaatgcagcaggaggattatcaaagaagttattttattta
gcctatgagaggaggttgcaagcaattaatgggagctggtttggagcttggggcttggaa
aaggccctctggaattttcttgtgttcagtaaagtccgagcaattctaggtggtcgtatc
cgttttatactgtctggtggtgctcccctttctggtgatactcagcaattcatcaacata
tgtcttggtgctccaataggtcaaggatatggtcttacagagacttgtgctggtgggaca
ttctcggattttgatgatacatctgttggccgtgttggaccacctcttccttgctcattt
gttaagttaatcgactggtctgaaggtggatatttaactaatgactcaccaatgcctcgt
ggtgaaattgtaatcggtggtccaaatgttactcttgggtacttcaagaatgaagaaaag
acaaacgaatcatacaaggttgatgaaaaaggaatgagatggttctacactggtgacata
gggaggtttcatacagatggttgccttgagatcatcgatcgtaaaaaggacattgttaaa
ctgcagcatggagagtatgtctcactgggaaaggttgaggcagctcttattgtcagcccc
tatgtggacaatataatgttgcatgctgatcctttccatagttactgtgtggcacttgtt
gtgacttctcagtccacattggaagaatgggcttcaaagcaagaaattccttattctagt
ttttcagaactctgctctaaagaagaaagcgtgaaagaggtgcatgcgtcactagtaaag
gaagcaaagaaagctcgtttggagaaatttgagattccagcaaaaataaaattgctttct
gatccctggacacctgagtctggcctagtcactgctgctctcaagatcaagagagaggtc
atcaagaaaactttccaggaagaacttgtgaagttatactcttcatag
DBGET
integrated database retrieval system
