Trifolium pratense (red clover): 123923754
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Entry
123923754 CDS
T08949
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123923754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123923754
Spliceosome [BR:
tpra03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
123923754
Complex B
123923754
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
PaaX_C
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
123923754
NCBI-ProteinID:
XP_045832439
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Position
LG4:41469312..41472096
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AA seq
204 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQQVGVAYNHLMVQRPNLPPVLPPPRFPIPGGQPLMSGFRPLMPRPMPVPGAPGYGS
APTMPQMMPPPGAPQMPGQLNSLPRPPSLAPPPTAPGSTAPPPSNGAPPMASSAMYQANA
PAPSSGGYDNYNSNSNAQAPEGNH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactactgtgactactgcgatacttatttgacccacgattccccatctgtt
agaaagcagcataattctggttacaaacataaggctaatgtaaggtcctactatcagcaa
tttgaagagcaacaaactcaaagtttaattgatcaacgaatcaaagaacatcttgggcaa
gctgcggcttttcagcaggttggcgtggcttataatcatctaatggttcagaggccaaac
cttcctcctgtattgccacccccaagatttcccattcctggaggtcaaccactaatgtca
gggttcagacctctcatgcctagacctatgcctgttcctggggcaccagggtatggttct
gcgcctaccatgccacaaatgatgcctccacctggtgctccccagatgccgggtcagtta
aattccctaccgcgacccccttcattagctcccccaccaacagctcctggaagcaccgca
ccgccaccttccaacggtgctccccctatggcatcatcagcaatgtatcaagccaatgca
ccggcaccatcatctggaggttatgataattacaattccaattccaatgctcaagcacct
gagggcaatcactga
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