Trifolium pratense (red clover): 123923825
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Entry
123923825 CDS
T08949
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123923825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123923825
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123923825
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
123923825
NCBI-ProteinID:
XP_045832519
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Position
LG4:complement(43751949..43758345)
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AA seq
318 aa
AA seq
DB search
MFFDGYGYHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR
NDAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVRVKNVTLPKGTYVKLQPHTK
DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIESKPANAISIIETDCEVD
FAPPLDYKEPEKAIAARSAGKAPEADKETPAEEPKFNPFTGSGRRLDGKPLSYQPPPVTS
SGSKDKSPAAPNVNSQSSTASSSQSNAPQTQGKLVFGSNPNRSKETGKATEAKAKQEPPK
EKEDKFQPFTGKKYSLRG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgatggatatggatatcatgggacatcgtttgagcagacgtatcgatgttac
cctgcttcttttattgaaaagccccaacttgaaagtggtgacaaaattataatgcctcca
tcagcccttgatcgtctagcatctctgcatattgattatccgatgttgttcgaacttcgt
aatgatgctgctgagcgggtttctcattgtggtgttctggagttcattgcagaggaaggc
atgatatacatgccatactggatgatggagaacatgcttttacaagagggggacattgta
agagtgaaaaatgtgacacttccaaagggaacatatgttaagttacagcctcacactaaa
gacttcttggatatttccaatccaaaggctatcttagaaactacgctgaggaatttttcc
tgcctgactactggagatagcattatggtggcttacaataacaaaaaatattatattgat
attattgaaagcaagcctgccaatgctataagcatcattgagactgattgtgaagtggac
ttcgcccctcccttagattacaaggaacctgaaaaggccattgctgcacgttctgctgga
aaggcaccagaagctgataaagaaacccctgctgaagaacccaagttcaacccatttact
ggatctgggagacgcttggacggaaagcctttgagttatcagcctccaccagttacttcc
tctggctccaaggacaagagtcctgctgctccaaatgtgaattcacagtcttccacagct
tctagttcacaaagtaatgctcctcaaactcagggcaagcttgtgtttgggtcaaatcca
aaccgcagtaaagaaaccggaaaggcaactgaggcaaaagcaaaacaagaaccccccaaa
gagaaagaagataaatttcagcctttcaccgggaagaagtattctttaagaggttga
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