Trifolium pratense (red clover): 123923827
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Entry
123923827 CDS
T08949
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123923827
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpra01007
]
123923827
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123923827
Enzymes [BR:
tpra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
123923827
Amino acid related enzymes [BR:
tpra01007
]
Aminoacyl-tRNA synthetase
Class II (U)
123923827
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123923827
Prokaryotic type
123923827
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
123923827
NCBI-ProteinID:
XP_045832521
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Position
LG4:complement(43763207..43773023)
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AA seq
704 aa
AA seq
DB search
MKTKTEKGRVRICFLFLDPSLSKSLFLSHPPPPAAALNPSLTALNLSPSPRRNAVQSSAA
AAPLLSSPRRTTPHRTQSFSSSRFRLSNITGIATAYLDDQNNTMPTIGVGRDLLFAALGR
TYTQEEFEDLCFDFGIELDDVTTEKAIVRKEKHLEEEADEDEEVIYKIDIPANRYDLLCL
EGLAQALRVFCGIQEIPTYKLADISKDAMLKMHVKPETSLIRPFVVCAVLRGLTFDKARY
NSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPSSINFTPLKQERSFRADE
LMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKRTVLSLPPIINGAHSAITLETKNVFIECT
ATDLTKAKVVLNTMVTAFAEYCENKFVIEPVEVISSDGKSHIYPDLSVHTMEVPLSYING
RIGISLEAEEVTKLLYRMQLYAKQSTSDNKQSNIIVSVPPTRSDVLHPCDVSEDVAIAYG
FNAIMDQAIVDNNGSNRLAASLTLLPLNEMSDLIRKEVAMVGFTEVLTFILCSKKENFSM
LNRKDDKSKAVIIGNPRSSDFEAVRTTLMPGILKTVAHNKDHPKPIKIFEVGDIAILDDN
DVGAKNLRQLAALHCGAHAGLEIIHGLVDKVMEKNGITFSPGDKSGGYYIEESDEPEFFA
RRQARIIYKGKQIGIFGIVDPEVLKNFDITDPCSFVELNIESFL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaaacagaaaaaggaagagttagaatttgctttctctttctcgatccctct
ctctcaaaatcgctgttcctctctcacccaccgccaccggccgccgctctcaatccctct
ctcactgctctcaatctctctccctcacctcgccgtaacgccgttcaatcttccgccgca
gccgcaccactgctcagctcaccgcgccgcaccacaccgcaccgcactcagtctttctct
tcgtctcgtttcaggctctctaatattactggaatcgccactgcctatctcgacgaccag
aacaacaccatgcctaccatcggtgtagggcgagatcttcttttcgcggctcttggaaga
acttacacacaagaggaatttgaagacttgtgcttcgattttgggattgagctcgatgat
gttactacggagaaagcaattgtgagaaaagagaagcatttggaagaagaagctgacgag
gatgaagaagttatctacaaaattgatattcctgcaaatagatatgacctactctgcctt
gaaggactggctcaagccctccgagttttctgcgggatccaggaaatccctacttacaaa
ttggctgacattagtaaggatgcaatgcttaaaatgcatgtgaagccagagacatctttg
attcgtccctttgttgtatgtgccgtattaagaggtttaacttttgataaagcgagatac
aacagctttattgatctacaagacaagctgcaccaaaatatttgtcggagaagaaccctt
gttgccatcggcactcatgatctggataaattagagggtccttttacctatgaggcttta
ccaccttcaagtattaactttacgcctctaaaacaggaaaggagcttcagggctgatgag
ctcatggagttctacaaatcagatttgaaattgaagaaattcttgcatataatcgaggac
tcccccgtttatcctgttatatatgatagtaagagaactgttttatctttacccccaatt
atcaatggtgcacattcagccatcactttggagacaaagaatgtattcattgaatgcact
gcaactgatctgacaaaggcgaaagttgttttaaatacaatggtaacagccttcgcggaa
tattgtgaaaataagtttgtcattgaacctgttgaagtgatttcttctgatggaaaatct
cacatataccctgatttatctgtccacactatggaagttcctctatcatacattaatgga
cggattggaatatcgttggaggcagaagaggttaccaagctcttataccggatgcaattg
tatgccaagcaatctacatctgacaataaacagtccaacataattgtatcggtacctcct
actagaagtgatgttcttcatccatgtgatgtttcggaggatgttgcaatagcttatgga
ttcaatgcaattatggatcaagcaatagtcgataataacgggtcaaatagattagcagct
tccttgacactacttcctcttaatgagatgagtgatctaatcagaaaagaggttgcaatg
gttgggttcacagaggtgttaacattcatactctgctctaagaaagaaaacttttccatg
ctaaaccgcaaagatgataaatccaaagcggttatcattggaaaccccaggtcttcagac
ttcgaggctgtccggactactcttatgcctggtattttgaaaactgttgctcacaacaag
gatcacccaaaacccataaagatttttgaagtgggtgatatagctattttggatgacaat
gatgttggtgcaaaaaatctccgccaacttgctgcactacactgtggtgctcatgcagga
ttggagataattcatggcttggtggacaaagtaatggaaaagaatgggattaccttttca
cctggtgataaatcaggagggtattatattgaggagtcagatgagcccgagttttttgct
cgtagacaagcaagaattatttataagggaaagcaaatagggatttttggcattgttgat
ccggaggtattaaaaaacttcgacattacggatccctgctcctttgttgaactcaacatt
gaaagtttcttgtaa
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