Trifolium pratense (red clover): 123923968
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Entry
123923968 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123923968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123923968
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123923968
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123923968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Sina_ZnF
Rad60-SLD
Sina_RING
Plexin_RBD
Ubiquitin_2
TBK1_ULD
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
123923968
NCBI-ProteinID:
XP_045832675
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All DBs
Position
LG4:complement(35867584..35871290)
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AA seq
339 aa
AA seq
DB search
MEPCTKDSDKIIDSGQDVSKDNSVTVLTSNPKVINCCICFQSLSIPVFQCDNGHIVCSTC
CSKLRNKCQKCSLPISSKRYKANENPLQSIQMSCQNEKYGCRETISHSGKRKHEEECIYL
PCYCPLSGCNFVASLEMLSNHFSHKHGDSLIEFSYGDTFIVSLKSNDETIVLQEENDGKL
FILNNSTMLSGNAINISCIDTNSSEAGYSYDILARSKMCSLKFHSSPKNVQWATLATLSP
QFLVIPFGYFSSSETPELEICITPKMQIFVMTLTGKMIPMRVESSDTIANVKAKILDKET
IPVHQQHLMFSDKPLDDSQTLANYNIQEKSTLNLILRLP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagccatgcaccaaagacagtgacaagatcattgattcaggacaagatgttagtaaa
gataactctgttactgtgttgacttccaatccaaaagtgattaattgctgcatttgtttt
cagtccttaagtattcccgtctttcagtgtgataatggccatattgtttgttctacctgc
tgttcaaaacttcgcaacaagtgtcagaagtgctcattgcccattagctcaaaacgctat
aaagccaatgagaatccattgcaatctatccaaatgtcgtgccagaatgaaaaatatggc
tgtagggagacaataagtcacagtggaaagaggaaacatgaagaagaatgcatctacttg
ccatgttactgtcccctttcaggttgcaattttgttgcctcattagaaatgttgtccaac
catttcagccataaacacggggattctctgattgaattttcttatggtgacactttcatt
gtctccttgaagtctaatgatgaaaccatcgtccttcaagaggaaaatgatggcaaacta
tttattctcaacaatagtactatgctttcaggaaatgcaatcaatattagctgcattgat
actaactcttctgaggctgggtatagttatgatatattggctaggtctaagatgtgcagt
ctgaagtttcattcttctccgaagaatgtccaatgggctactttagcaactctttcacca
caattcctcgtgattccatttggttattttagttcttctgaaactcccgagctagaaatt
tgcataacccctaagatgcaaatcttcgtaatgactctgactggaaagatgatccctatg
agggttgagagttcggacacgatcgccaatgtgaaggcaaagattcttgacaaggaaaca
atcccagtgcaccagcaacatctgatgttttccgataagccactagatgacagccagacc
cttgctaattataacatccaagagaagtcaactctcaacctcattctccgccttccctag
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