Trifolium pratense (red clover): 123924076
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Entry
123924076 CDS
T08949
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like
KO
K10867
nibrin
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123924076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123924076
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123924076
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123924076
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123924076
BRCA1-C complex
123924076
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
123924076
NCBI-ProteinID:
XP_045832796
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Position
LG4:complement(34450269..34459003)
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AA seq
573 aa
AA seq
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MVWGLLPVDSLSGEDNYYIFKTGTYKVGRKGCDVIITKDKGVSRVHAEIVVNTMKMLNPR
HLSTSVQIRDCSKYGTFVSKNVGLKKKVHEQPNKEAALQDGDLVSFGTGSATYKFCYVPL
ILFNCSSNQVDRSLEQKISSIGASIAHTLNEECTHVLVDQLMPLKKDLVEAVVAKKYCVL
KTWLEFFAEKNISNEIPSCHSHIPTVSVEGASIKVADPKARENCLKGYTFVLESVHLYKF
GDQLKSLLEVAGAKTISFQEFSSNSQGSDYGDDNRMVCVIPGGAACKPDIFNKLLSSLLK
VNEMDITNAALSGDLDLSILKSPCVVISSSCSTDETIVADSDTEVETATSPYANEANEAL
CDGTNVKYVKSEELNDDSGTSDKRENERMEAPLNDVSTSLHKRKNDRMEASLDDVSTSLY
VTKRAKTEMSLDVSVRSDTHATSFKDGTVSVKVKKDEVDNYASGNSDIVYSENLIVRDTN
ILANRSSALNNRVPNFKRFRKPQTQSGNSFNNLVPFAKYPYKDSDYGNEERAEYVKEEKR
RKQREAVADDLFINNQKGKKKGTAGSLHGILTR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggtcttctccccgttgattctctttccggtgaagataattactacattttc
aaaactggaacttacaaagttggtcgaaaaggttgcgatgtgatcatcactaaagataaa
ggggtttctcgggtccatgcagaaatagttgttaatacaatgaagatgttaaatcctcgt
catttgtctaccagtgtacagataagagattgctcgaagtatgggacatttgtgagcaag
aatgttgggctcaagaaaaaagttcatgagcaaccaaacaaagaagcagcattacaggat
ggcgacctagtttcttttggcactggtagtgctacctacaagttttgctacgtccccctc
attcttttcaactgttcctcaaatcaagtggatcgatctcttgaacagaaaatttcatca
attggtgctagtattgctcataccttgaatgaagagtgcacacacgtgctggtagatcaa
ctcatgcccttaaagaaggatcttgttgaagcagttgtggcgaaaaaatattgtgttctc
aaaacttggcttgagttttttgcagaaaagaacattagcaatgaaattcctagctgtcat
tcacatattccgacagtgtcagtggaaggagcttctatcaaagttgctgaccctaaagct
cgcgaaaactgtttgaaaggatacacttttgtattggaatctgtgcatttgtataagttt
ggggatcagctaaagtctttactggaagtagctggtgctaaaactatttcatttcaagaa
ttctcttcaaatagccaaggttcagattatggagatgataatcgtatggtttgtgtcatc
ccaggaggagccgcatgcaaacctgatatcttcaataaattactaagttccttgctaaaa
gtcaatgagatggatataacaaatgctgctcttagtggagatctagatctgtcaatttta
aaatcaccatgcgtggttatttcatcgtcatgctctacagacgagacaattgtagcagat
tcggatactgaagttgaaacagccacatcaccctacgcaaacgaggcaaacgaggcatta
tgtgatggcactaatgtaaagtatgtaaaatcggaagaattgaatgatgattctggaact
tcagacaagagagaaaatgagagaatggaggcacccttaaatgatgtatcgaccagtttg
cataagaggaaaaatgatagaatggaggcatccttagatgatgtttctaccagtttgtat
gtaacaaaacgtgcaaaaacagaaatgtccctggatgtttctgtccgatctgatacacat
gctaccagcttcaaggatggtactgtcagtgtcaaagtgaagaaagacgaggttgataat
tatgcaagtggaaattcagatattgtttacagcgaaaatttaattgttcgagatacaaac
atacttgccaacagaagttctgcactaaacaacagagttccaaatttcaaacgctttcga
aagccacaaactcaatctggaaatagtttcaacaaccttgttccatttgcaaaatatcca
tacaaggattctgactatggaaatgaggagagagctgagtacgtgaaggaggagaaaaga
cgaaaacaaagagaagctgtggctgatgatctatttattaataatcagaagggaaaaaag
aaaggcacggctggttctcttcacggcattcttactagatga
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