Trifolium pratense (red clover): 123924130
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Entry
123924130 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123924130 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123924130
Membrane trafficking [BR:
tpra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123924130
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123924130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_VPS8
WDR55
Synaptobrevin
PEP5_VPS11_N
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
PQQ_2
DUF3679
Motif
Other DBs
NCBI-GeneID:
123924130
NCBI-ProteinID:
XP_045832860
LinkDB
All DBs
Position
LG4:25225597..25239437
Genome browser
AA seq
1106 aa
AA seq
DB search
MFSRFFQKSSPQQSPQNVMQSEKFDPKVLLHYGVPSSASILAFDRVQRLLAVATLDGRIK
VFGGDNIEGIMISPKQTSFKNLEFLENQGFLASVSSDNKIQVWDLRNRQIASALQWESII
TSFSIIYGTSYMLVGTEHGLVYVLKFDSEDRKVNILPYYIPTDVISEAVGKSLDNVSVVK
VLHQPCSNGKRLLVAYENGVLLLWDAYEDRIVLIRDHKDIELKRKKVTSYLDDPKNEHSD
DKLEHEEEDKEISCVSWASSDGSVVVVGYVDGDIMFWNLPTADSPIDQDKKMSNNLVKLQ
LSPSDRRLPIILLHWCANKSWISSGGELFVYGGEKIGSEEVLTVLSVEWSRGIENLKCTG
RIDISLRGSFADMVLLSSDCHAEGDCNMLFVLTSPGQLDLYEKNCLSSLMSKKQRKTSSP
TMQYSIVIPTLEPQLTTTMLDVVDHDAKSFTALSEILVAAKQLSVQNQRSGKIKWPLIGG
VPGQLFKEDRLIIQIFIAGYQDGSVRIWDASYPALSLVYNIKPEVNGAKMGSANSPVSAL
DFCPDTLHLAVGDESGIVRLYGLIRSSDDTTLHFVTENGTEVHNVNQGDGPHCKAVFSLQ
NSSVCGLQFANHGVKLAVGYEHGQVAMLDTITSSVLFLTSSESDTSSAVVSLNAKFSDTS
CLNIPQEPVSDISDNSGKGLVFIMTRDAHLVAIDSETGNMVCNRTMSPDVKSNAISMHII
DATFELSAEKLQSHSPQKNDSGMQANIQSENTQDKVETTNTIDNSDFAQIVLNSLILLCS
ESELSLQSLSSMIEGSNKYTRKVNLVKRCCWTNIFKKDDRERVLVVLYQTGDIELRSLAT
LEVLGEKSLMSILRWNWKTDMEKTICSSSNGQIILVNGNEAAFLSLLPCENVLWIPECFP
CLHDEVLAAAVDLTKSLSPNQSEKQGASAIFHNIARNFKARKSGHNTNQEVHNNYLENLE
RCFSSPPFLKPSSDTEDKLDDFELDIDEIHIEEPEVFLSSQKIHIDKKEKAKEKETADRQ
KLFEESATDSKPRARTTEEIKAKYRKTGVQDAATAAALAKDKLMERQEKLQLLNDHTEEL
QNGAQDFASMAAELAKQMENRKWWQL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttttctagattcttccagaaatcatcaccgcaacaatctccacagaatgtgatgcaa
agtgagaaattcgatccaaaagttcttcttcactatggagttccatcctctgcgtctatt
cttgcgtttgatcgcgttcaacgtttattggcagtagcaacacttgatggtaggataaaa
gtatttggtggtgacaatattgaagggattatgatctctcctaagcaaacatccttcaag
aatttagagttcttggaaaatcaaggtttccttgctagcgtttcaagtgataataaaata
caggtttgggatttgagaaacaggcaaattgcttctgctttgcaatgggaatccatcata
acttctttctctattatatacggcaccagttacatgttagttggaactgagcatgggttg
gtgtatgtgttaaagtttgattccgaagacagaaaagttaatatattaccttattatatt
cccacagatgttatatcagaagcagttggaaagtcacttgataatgtttctgttgtaaaa
gttcttcatcaaccttgttctaatggaaagagactgttggtcgcatatgagaatggtgtg
ctgttactctgggatgcttacgaagatcgaatagttctcatcagagaccacaaggacatc
gaattgaagagaaagaaagtcactagttatttggatgatcctaagaatgaacattccgat
gataaattagagcatgaagaagaagataaggaaataagctgtgtttcttgggcatctagt
gatggatcagttgtcgttgttggttatgtagatggtgatataatgttttggaatttgcca
actgctgactctccaatagatcaagataaaaaaatgtcaaataatctagtcaagcttcaa
ttatcaccatcagatagaaggctccctattattcttctacactggtgcgccaataaatct
tggatcagcagtggcggtgaactttttgtctatggtggtgagaaaattgggtccgaagaa
gttctgacagttttgagcgttgaatggtcgcgtgggatagagaatctcaagtgcactggc
cgcattgatatttcacttcgtggttcttttgctgatatggttttgttgtctagtgattgc
catgcagagggagattgtaatatgctatttgtattgacaagtcctggacaactggatctt
tatgaaaagaattgtttatcttctttgatgtctaagaaacaaagaaagacttcttctccc
acaatgcaatattccattgtcattcccactcttgaaccgcagttgacaacaacaatgctt
gatgttgtagaccatgatgcaaagtcatttaccgccttgtctgagattcttgtagctgca
aagcagctatcagtacaaaatcagagaagtgggaagataaagtggcctttgattggtggt
gttcctggtcaacttttcaaagaagaccgtcttattattcaaatattcatagcaggttac
caagatggatctgttcggatatgggatgcttcatatcctgctttgtcacttgtttacaac
ataaaacctgaggtgaatggtgctaaaatgggcagtgcaaactcaccagtgtcagcattg
gatttttgcccagatactctacatctggcagttggcgatgaaagtggcattgttcgtctt
tatgggctaataaggagttcagatgacacaactttgcattttgtgacagaaaatggaact
gaagttcataatgtgaatcaaggcgatggacctcattgcaaagcagtgttttctcttcaa
aattcttctgtatgtgggctacagtttgcaaatcatggagtgaagcttgcagttggatat
gagcatgggcaggtggccatgcttgataccattacatcatcagttctgtttcttacaagt
tctgaatctgacacgtcttctgcagtggtttctctgaatgcaaaattttcagacacttct
tgcttaaacattccacaggaacctgtatctgatatttctgacaactctggaaaggggcta
gtcttcattatgacaagggatgcacacttggttgcaatagattctgaaacaggaaatatg
gtttgtaataggacaatgagcccagatgtaaagtcaaatgcaatttcaatgcacattata
gatgccacttttgaactatctgctgaaaaactgcaatcccactcgcctcagaagaatgat
tctggaatgcaagctaacattcaatctgaaaatacacaagacaaagttgagactactaat
accatagacaattcagattttgcgcagatagtattgaactcactcattttactttgctct
gagagtgaattgagcttacaatctttgagttctatgattgagggtagcaataagtacaca
aggaaggtaaaccttgtaaaacgatgctgctggactaatatatttaaaaaagatgacaga
gaacgtgttctggttgttctgtaccaaactggagacattgaattaaggtccttagcaact
ctggaagtgttgggagaaaagtctttaatgtcaatcctaagatggaactggaagaccgac
atggagaagacaatatgttcttcatcaaatggacaaataattctggtcaatgggaatgaa
gctgctttcttgtcactgttgccgtgtgaaaatgtgctctggattccagagtgttttcct
tgtcttcatgatgaagttcttgcagctgcagtagatcttactaagagcctatctccaaac
caaagtgaaaaacagggagcatcggctatcttccataatatagctaggaacttcaaagcg
aggaaatccggtcacaatacaaatcaagaagttcataataattatttggaaaatttagaa
cgatgtttctccagtcctccattcttgaagccttcttcagatactgaagataagctggat
gattttgaacttgacatagatgaaattcacattgaagaacctgaggtctttttatcttct
cagaaaatccatattgacaagaaagaaaaagcaaaagaaaaagaaacagcagacagacaa
aagttatttgaggagtcagccaccgactcaaaaccaagagctagaacaaccgaagaaatt
aaggctaaatacagaaagactggggtccaggatgctgctacggcagctgcacttgcaaag
gataagcttatggagaggcaagaaaaactccagttgctcaacgaccatactgaagagttg
cagaatggggcacaagactttgcttccatggcagctgaacttgctaaacaaatggaaaat
cgtaaatggtggcaactataa
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