Trifolium pratense (red clover): 123924318
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Entry
123924318 CDS
T08949
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like
KO
K10867
nibrin
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123924318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123924318
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123924318
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123924318
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123924318
BRCA1-C complex
123924318
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
DUF5806
Motif
Other DBs
NCBI-GeneID:
123924318
NCBI-ProteinID:
XP_045833123
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Position
LG4:complement(35199541..35209263)
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AA seq
576 aa
AA seq
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MVWGLLPVDSLSGEDNYYIFKTGTYKVGRKGCDVIITKDKGVSRVHAEIVVNTMKMLNPR
HLSASVQIRDCSKYGTFVSKNVGLKKKVHEQPNKEAALQDGDLVSFGTGSATYKFCYVPL
ILFNCSSNQVDRSLEQKISSIGASIAHTLNEECTHVLVDQLMPLKKDLVEAVVAKKYCVL
KTWLEFFAEKNISNEIPSCHSHIPTVSVEGASIKVADPKARENCLKGYTFVLESVHLYKF
GDQLKSLLEVAGAKTISFQEFSSNSQGSDYGDDNRMVCVIPGGAACKPDIFNKLLSSLLK
VNEMDIINAALSGDLDLSILKSPCVVISSSCSTDETIVADSDTEVETATSPYANEANEAN
EALCDGTNVKYVKSEELDDDSGTSDKRENERMEAPLNDVSTSLHKRKNDRMEASLDDVST
SLYVTKRAKTEMSLDVSVRSDTHATSFKDGTVSVKVKKDEVDNYASGNSDIVYSENLIVR
DTNILANRSSALNNRVPNFKRFRKPQTQSGNSFNNLVPFAKYPYKDSDYGNEERAEYVKE
EKRRKQREAVADDLFINNQKGKKKGTAGSLHGILTR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggtcttctccccgttgattctctttccggtgaagataattactacattttc
aaaactggaacttacaaagttggtcgaaaaggttgcgatgtgatcatcactaaagataaa
ggggtttctcgggtccatgcagaaatagttgttaatacaatgaagatgttaaatcctcgt
catttgtctgccagtgtacagataagagattgctcgaagtatgggacatttgtgagcaag
aatgttgggctcaagaaaaaagttcatgagcaaccaaacaaagaagcagcattacaggat
ggcgacctagtttcttttggcactggtagtgctacctacaagttttgctacgtccccctc
attcttttcaactgttcctcaaatcaagtggatcgatctcttgaacagaaaatttcatca
attggtgctagtattgctcataccttgaatgaagagtgcacacacgtgctggtagatcaa
ctcatgcccttaaagaaggatcttgttgaagcagttgtggcgaaaaaatattgtgttctc
aaaacttggcttgagttttttgcagaaaagaacattagcaatgaaattcctagctgtcat
tcacatattccgacagtgtcagtggaaggagcttctatcaaagttgctgaccctaaagct
cgcgaaaactgtttgaaaggatacacttttgtattggaatctgtgcatttgtataagttt
ggggatcagctaaagtctttattggaagtagctggtgctaaaactatttcatttcaagaa
ttctcttcaaatagccaaggttcagattatggagatgataatcgtatggtttgtgtcatc
ccaggaggagccgcatgcaaacctgatatcttcaataaattactaagttccttgctaaaa
gtcaatgagatggatataataaatgctgctcttagtggagatctagatctgtcaatttta
aaatcaccatgcgtggttatttcatcgtcatgctctacagacgagacaattgtagcagat
tcggatactgaagttgaaacagccacatcaccctacgcaaacgaggcaaacgaggcaaac
gaggcattatgtgatggcactaatgtaaagtatgtaaaatcggaagaattggatgatgat
tctggaacttcagacaagagagaaaatgagagaatggaggcacccttaaatgatgtatcg
accagtttgcataagaggaaaaatgatagaatggaggcatccttagatgatgtttctacc
agtttgtatgtaacaaaacgtgcaaaaacagaaatgtccctggatgtttctgtccgatct
gatacacatgctaccagcttcaaggatggtactgtcagtgtcaaagtgaagaaagacgag
gttgataattatgcaagtggaaattcagatattgtttacagcgaaaatttaattgttcga
gatacaaacatacttgccaacagaagttctgcactaaacaacagagttccaaatttcaaa
cgctttcgaaagccacaaactcaatctggaaatagtttcaacaaccttgttccatttgca
aaatatccatacaaggattctgactatggaaatgaggagagagctgagtacgtgaaggag
gagaaaagacgaaaacaaagagaagctgtggctgatgatctatttattaataatcagaag
ggaaaaaagaaaggcacggctggttctcttcacggcattcttactagatga
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