Trifolium pratense (red clover): 123924378
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Entry
123924378 CDS
T08949
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123924378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123924378
Membrane trafficking [BR:
tpra04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
123924378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
123924378
NCBI-ProteinID:
XP_045833201
LinkDB
All DBs
Position
LG4:4222615..4238803
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AA seq
1697 aa
AA seq
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MSASQSLGGSSRCGRILGPSLDKIIKNAAWRKHSQLVSSCKSTLDKLESISESVDSKSPL
LGFSSSDAEYVLQPLFLALDSAYAKVVEPALECTFKLFSLGLICGEIDNSSHSVIVFNII
DAICKSGGLGEEAIELGVLRVLLSAVRSPCILIRGDCLVQIVRTCYNVYLGGVNGTNQIC
AKSVLAQIMTIVFTRVEEDSMDVSVKRVSVSELLEFTDKNLNEGNSIHFCQNFINEVMEA
TQGVPLKPSPIDIPNASPPLPKQAVDEASTDTEAGTDGSKIREDGFLLFKNLCKLSMKFS
SQQHPDDRILLRGKILSLELLKVVMDNGGSIWRVNERFLNGIKQYLCLSLLKNSALSAMA
IFQLQCSIFMNLLSKFRSGLKKEIGMFFPMLILRVLENVLQPSFLQKMTVLNLLDKLSQD
PQIIIDIFVNYDCDVDASNIFERIVNGLLKTALGPPTGSTTSLSPAQDITFRHESVKCLV
SIIKSMGAWMDQQIRPGDLNLVKTPESTSVGESPLTLNGEEGNASDLELHPDVNSEFSDA
ATLEQRRAYKVELQKGISLFNRKPSKGIDFLISNKKIGSSPEEVALFLKNTVGLDEAKIG
DYLGEREDFSLKVMHAYVDSFNFKGMDFGEAIRFFLQGFRLPGEAQKIDRIMEKFAERFC
KCNPSSFSSADTAYVLAYSVIMLNTDAHNNMVKDKMTKADFIRNNRGIDDGKDLPEEYLG
ALYDKIVRNEIKMKADSSAPQSKQENSFNRLLGLDGILNLVNWKQNEEKAVGANGLLIRH
IQEQFKSNSRKSESAYHVVTDVAILRFMVEVCWGPMLAAFSVTLDQSDDRVATSQSLQGF
RHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAGDMKQKNVDAVKAIISIAIEDGDHLQEA
WEHILTCLSRIEHLQLLGEGAPSDATFFTSSNFEAEEKTQKTLGFSSFKKGTLQNPAMLA
VVRGSSYDSTSVGANPSALVTPEQINSFISNLNLLDQIGNFELNHVFAHSQRLNGEAIVA
FVKALCKVSISELQSPTDPRVFGLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVGLSE
NLSVAIFAMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSNSTEIRELIVRCISQ
MVLSRVSNVKSGWKSVFMVFTAAAADERKNIVLLAFETMEKIVREFFPYITETETTTFTD
CVGCLLTFTNSRFNSDVSLNAIAFLRFCAVRLADGGLVCNKNSSADGSSVVLTNGVSDVH
ALTDNDDHVSFWIPLLSGLSKLTYDPRSAIRKSSLEVLFNILKDHGHLFSRTFWNSIFCS
VIFPVYNSVCGKRDMNILDGHSSVSVHTEGSTWDYETSPVAAECLIDLFVTFFDMVRSQL
PGVVSVLTGFIRSPVQGPASTGVAGLMRLTGDLGKRLSEEEWKEIFLCLKDAATSTVPGF
IKVLRTMSNIAVLKISQSSDHDMTNDEFDDDNLQTATYVVSRTKNHIAMQLLILQVTTDL
YRKHQRSLSADNIKVLIELYSSIALHARQLNRESVLLKKLQKACSILELSAPPVVHFENE
SFQNHLNFLQNLHDDQYFVHGDIDLEQELVTVCENVLDIYLNCAGSVSTFQKSDTQPMPR
RKLPLSSAKKEEIAARTSLVISALQGLAGLEKDSFRRYIPRFFQLLVDLVRSEHTSGEVQ
LALSNMFRSSVGPIIME
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatcgcaatccctgggaggttcttcacggtgtggcagaatccttggtccatca
ctcgacaagatcatcaagaacgccgcctggcgcaaacactctcaacttgtctcatcctgc
aaatccacccttgacaagctcgaatccatttccgaatccgttgattccaaatcccctctt
ttaggtttctcctcctctgatgccgaatatgtccttcaacctctatttctcgcccttgac
tctgcttacgctaaggttgttgagcctgctctcgaatgcacctttaaacttttctctctt
ggtcttatctgcggtgagatcgataattcttcacactcagttatcgtcttcaatatcatc
gatgcaatctgtaagtcgggcggccttggcgaggaggcaattgagttgggtgtgctcagg
gtcctgctttcagctgtaagatccccttgcattctgatccgcggagattgtcttgttcag
attgttagaacttgttataatgtctatctcggtggcgtaaacggaactaatcagatctgt
gctaagtctgttcttgcccagatcatgactattgttttcaccagagtcgaggaggactcc
atggatgtctccgttaaaagggtttctgttagtgaactcttggaattcactgataagaat
ttgaacgagggcaattccatacatttttgccaaaattttatcaatgaggtcatggaggcc
actcagggtgttcctctcaaaccatcccctattgatatacccaatgcctctccacccttg
cccaaacaagcagtggatgaagcttctaccgataccgaagctggaactgatggaagtaaa
ataagggaggacggttttcttctttttaaaaatttgtgcaaactgtccatgaaattctca
tctcaacaacaccctgatgaccgaatcctcttgagagggaaaattttgtccttggagctc
cttaaggttgtcatggataatggcggctcaatatggcgcgtcaatgagaggtttctcaat
ggcatcaagcagtatctttgcttgtcattattaaagaacagtgccctttcagcaatggcc
atatttcagcttcagtgttccattttcatgaacttgttatcaaaatttagatcaggattg
aaaaaagaaatcggcatgttttttcccatgcttatcctccgagtacttgagaatgttctt
cagcccagttttctgcagaaaatgactgtcctaaacttattggacaaattatctcaagat
cctcagattattattgacatttttgtcaattatgattgtgatgtggatgcttcaaacata
tttgaaaggatagtcaatggccttcttaaaactgctttgggaccacctacggggtcaacc
acatctttgtctccagcacaagatattactttccgacatgaatctgtgaagtgcttggtc
agcatcattaagtcaatgggagcttggatggaccagcagataaggccaggagacttgaat
cttgtaaagactcctgaaagcactagcgtaggagagagtccgctaactctgaatggagaa
gaaggaaatgcttctgatcttgagttacatcctgatgtaaattctgaattctcagatgct
gccacattagagcagcgccgggcatacaaagttgagcttcagaaaggtatatcacttttt
aatagaaaaccttccaagggcattgatttcttgataagcaacaaaaaaattggtagttct
ccagaagaagtggctctgttcctgaagaatactgttggccttgacgaggccaagattggg
gactatttgggggaaagggaggatttttctctaaaagttatgcatgcttatgtagattcc
tttaacttcaaagggatggactttggtgaagctatacgattttttcttcagggctttagg
ttgcctggtgaggcacagaaaattgatcgcattatggagaagtttgctgagcgcttttgt
aaatgcaaccctagttctttcagcagtgcagatacagcctacgttcttgcttactctgta
ataatgcttaatacagacgctcataataatatggtgaaagataagatgacaaaggctgat
tttatccgaaacaaccgaggaatagatgatggaaaggatttaccagaggaatatcttggg
gccctttatgataaaattgttagaaacgaaattaagatgaaggctgattcttctgcacct
cagagtaagcaagaaaatagctttaatagattgctgggattggatggtatactcaatctt
gtgaattggaagcaaaatgaggaaaaagcagtgggtgcaaatgggcttctcattcggcac
attcaggagcagtttaaatcaaattcacgaaaatcagaatctgcatatcatgttgtcaca
gatgtagctatactgaggtttatggtggaagtttgttgggggcctatgctggctgcattc
agtgtgacgcttgaccagagtgatgacagggtagctacttctcaatctttacagggattt
cgacatgctgtgcatgttactgcagtgatgggcatgcagactcaaagggatgcttttgtt
acatctgttgccaaatttacttatctgcattgtgctggagatatgaaacagaaaaatgtt
gatgctgtcaaggcaataatatcaattgccattgaagatggtgatcatctacaagaagca
tgggaacacatactaacatgcctctcccgaattgagcatttgcagctgttaggtgagggg
gccccaagtgatgcaaccttcttcacttcatctaattttgaagcggaggaaaaaacacaa
aaaacactaggtttctcttcttttaagaaaggaactctccaaaatccagccatgttggct
gtcgttcgtgggagttcgtatgacagtacaagtgttggggccaacccctccgcattggta
acaccggaacagataaatagtttcatctctaacttgaatcttctggatcaaattggaaac
tttgaattgaaccatgtgtttgctcatagtcaacggttgaatggcgaagcaatagtagca
tttgtgaaagctctttgcaaagtttccatctcagagttacagtctccaacagacccccgt
gtatttggcctgacaaaaatagtagaaatcgcgcattataatatgaaccgcatcagatta
gtgtggtctcgcatatggaatgttctttccgatttctttgtgtcagttggcttgtcagaa
aacctgtcagttgcaatctttgcgatggattcactacgacaacttgcgatgaaatttttg
gagcgtgaggagctggctaattataacttccagaatgaatttctgagaccattcgtgatt
gttatgcagaaaagcaactcgacagaaattagagaattaatagttcgatgcatttcacag
atggtccttagccgtgtcagtaatgtgaaatctggctggaaaagtgtttttatggttttt
acagctgcggcagctgatgagcggaagaatattgtattgttagcatttgagactatggag
aaaatagtgcgtgaattttttccttatattactgagacggaaacaacgaccttcactgat
tgtgttggatgccttttgacatttacaaatagccgattcaatagtgatgttagcctcaat
gcaattgcatttcttcgtttctgtgcagtcagacttgctgatggaggacttgtatgcaat
aagaacagcagtgctgatggctcatcagttgtattaacaaatggtgtttcagatgtacat
gctcttactgataacgatgatcatgtgtctttttggattcctttgttatcagggttgtca
aaattaacttatgatccaagatcagctatcagaaagagttctttggaggttctttttaac
attttgaaggatcatggtcacctattctcacgcacattttggaatagcattttctgttct
gttattttccctgtatataactcagtatgtggaaaacgagacatgaatatactagacggt
cattcttcagtatctgtgcacactgaaggaagcacatgggattacgagacttctccggta
gcagcagaatgtttaatagatttgtttgtcaccttctttgatatggtgaggtctcagcta
ccaggtgtggtttctgtactgacagggttcattagaagtcctgttcagggtccagctagt
actggagtcgctggattaatgcgtctcacaggtgaccttggtaagaggctttcagaagaa
gagtggaaagagatttttctgtgtttgaaagatgctgctacatcaacagtgcctggattc
ataaaggtcttgagaaccatgagtaatattgcagtacttaaaatttcacagtcttctgat
catgatatgacaaatgatgagtttgatgatgacaatctgcaaacagccacatatgttgtc
tcaagaacaaagaatcatattgctatgcagctacttattttacaggttacaactgatttg
tacagaaagcaccagcgatccttatcagcagacaacatcaaagtccttattgaattgtac
tcatctattgctttgcatgctcgacaattaaacagagagtcagtcctgctgaaaaagttg
cagaaagcttgctctatcttggaattatctgccccgcctgtggttcattttgaaaatgag
tccttccaaaatcacctcaactttctacaaaacttacatgacgatcaatattttgtgcac
ggtgatatagatctagaacaagagttagtaactgtatgtgaaaatgtattggacatatat
ctaaattgtgccggctctgtgtccacatttcaaaagtctgatacacagccaatgccacgt
agaaagctccctctgagttcagcaaagaaagaggaaatagctgctaggacatctctggtc
atctcagcactgcaagggttggctggtctagaaaaagattcattcaggaggtatattccc
cggttctttcaattattggtggatctcgtgaggagtgaacacacctctggagaagttcag
cttgccttgagtaatatgtttcgttcatctgtaggccccattataatggaatga
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