KEGG   Trifolium pratense (red clover): 123924628
Entry
123924628         CDS       T08949                                 
Name
(RefSeq) protein SMG7-like
  KO
K14409  protein SMG7
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123924628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123924628
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     123924628
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123924628
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 123924628
NCBI-ProteinID: XP_045833530
LinkDB
Position
LG4:complement(39900834..39907246)
AA seq 977 aa
MMIVEMDKMSAPSSRERAQRLFDKNIELEKKRHISAQAQVPSDPNIWPQLRENYEAIILE
DHAFSEKNGIEFALWQLHYKRIEELRKYFNAARTSASSKSSQGGKGSVRPERVTKIRLQL
KTFLSEATGFYHDLIMKIKSKYGLPLGYFEDSENRIVMEKDGKKSAEMKKSLISCHRCLI
YLGDLARYKGLYGEGDSTKREFTAASSYYLQAASIWPSSGNPHHQLALLASYSGDDLATI
YRYFRSLAVDSPFTTARDNLIVAFEKNRQSYCQLSGDVKAVAVKESSGQLAGRGRGKVEA
KLVTRGNGVEASPKNKGASNIQETYKSFCTRFIRLNGILFTRTSLETFTEVLSLISTGLR
ELLSSGQDEELNFGQDTLENGLAIVRIISIIIFTVHNVNKESEGQTYEEIIQRAVLLQNA
FTAAFELMSIIIERCVQVKDPSCSYLLPGILVFVEWLACYPNHAAANDVDENQATVRSKF
WNHCISFWNKLLSVGSVSIEDDEEDTCFNNMSKYEEGETENRLALWEDFELRGFVPLLPA
QTILDFSRKHSLGSDGEKERKARVKRILAAGKALANVVRVDQKMIYFDSKGKKFIIGVEP
RISNDYVLVSGIPVVDDLLEENAADKPKVGIVQPDHHQYVEEEDDDEVIVFKPIIAEKRT
NVAVVSSGASHKGLESIPKASGGDIKFNVDPTFNTANDVNHQMFLPASVSSMMPQHLQPV
QQHSSRCPEEGMSLANIFEGLGFLENGHVVKPNFPPHEAVSTFNHASLTVPNQQSVSTGT
SSFYGISKAEDLMIPSNVDTFASSGVITNNSYVNPSSVLQTGLKKSPVSRPSRHLGPPPG
FSHVSPKLDMESTVPDSINGNPVMDDYSWLDGYQLPSSTKGLAPNGPITYTQSNSQQVNN
NILSGTASFPFPGKQVPSALQGPIQNGWQDYHTSELLKAHHQQQLQPQQPLANGNQHFTP
LPEQFQGQSIWTGRYLV
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgatgatagtagagatggataaaatgtctgctccttcatcgcgggagcgtgcacaacgc
ctttttgacaagaacattgaattggagaagaagcgccatatatcagctcaagcacaggtc
ccgtcagatccaaatatttggccacagttgcgtgagaattatgaagcaataattctcgag
gatcacgctttttccgagaagaatggtattgagtttgctctttggcaattgcattacaaa
cggattgaagaattaaggaaatatttcaatgctgctcgtacttctgcaagctcaaaatca
tctcagggcgggaaaggttctgtacgacctgagcgggtaactaaaataaggctgcagttg
aagactttcctttcagaggcaactggattttaccatgatcttatcatgaaaatcaaatca
aagtatgggcttcctcttggttactttgaggattcagagaatcggattgtgatggagaaa
gatggaaagaaatctgctgagatgaagaaaagtttgatatcttgtcatcgttgtttgata
tacttaggtgatcttgctcgctacaaaggattgtatggtgaaggtgattcaacaaagcgt
gagttcacagcagcttctagttactatttacaagctgcgtctatttggccttcaagtgga
aatccccaccatcagctggctttgttggcttcatattctggcgatgatctggcaactatt
tatcgttattttcggagtctggctgtggatagtccatttacaactgctagagataattta
attgttgcatttgagaagaatcgtcaaagttactgtcagctttctggtgatgttaaagct
gtcgcagtcaaggaatcttctgggcaattagctggcagaggaagaggaaaagtagaagca
aaacttgtgacaaggggtaatggcgtggaagccagtcctaaaaacaaaggagcatccaat
atacaagagacttacaaatccttctgcactcgattcatccgtctaaatggaatcttgttc
actcgtacaagccttgagactttcactgaagttctctctcttattagcactggcctgcgt
gagcttctgtcatcaggtcaagatgaagagctgaattttggccaggatactcttgagaat
ggtcttgccattgtcagaataatttccattatcatcttcacagttcataatgtgaataag
gaatctgaaggtcaaacttatgaagaaattatacagcgtgctgttctacttcagaatgca
ttcactgcagctttcgaactgatgagtattataattgagagatgcgtccaggtgaaggat
ccctcttgtagctatcttttaccaggcattttggtttttgttgaatggttggcatgttat
cctaatcatgctgctgccaatgatgtggatgagaatcaagcaactgttagatcaaaattt
tggaatcattgtatttccttctggaacaaactactttcagttgggtctgtgtctattgaa
gatgatgaagaggatacttgttttaataacatgagtaagtatgaagaaggggaaactgaa
aatcgacttgctttgtgggaggactttgagttaagaggatttgttccacttctccctgca
caaacaatcttggatttttcaaggaagcattcccttggaagtgatggtgaaaaagaaaga
aaagcccgggtaaaaaggattttagctgcaggaaaggctttagcgaatgttgttagggtt
gatcagaaaatgatatattttgactcaaagggaaagaaatttataattggtgttgagcct
cgtatctcaaatgattatgttcttgtctctggcatacctgttgtagatgatttattggaa
gaaaacgcagcagacaagccaaaggtaggtattgttcagccagaccatcaccagtatgtg
gaagaagaggatgatgatgaggttattgtttttaaacctataatagccgagaagcgaacc
aatgtggcagttgtctcatcaggtgcatcccacaaaggcttagagtctatcccaaaagct
tctggaggggatataaaatttaatgtcgatcctacttttaacactgccaatgatgtgaac
catcaaatgtttttgcctgcttctgtcagttctatgatgcctcaacacttgcaaccagtt
cagcaacattcttcaagatgcccagaggagggaatgtctctggccaacatttttgaaggt
cttggcttcttggagaatgggcatgttgtgaaacctaatttcccaccgcatgaagctgta
tcaacctttaaccatgcctcacttacagttcctaatcagcaatctgtaagtactggtact
agctcattttatggtatctcaaaagctgaagacttgatgataccatccaatgttgatact
tttgcatcttctggagtcattacgaataactcttatgtgaatccatcatcagtattgcaa
actggtttgaaaaaatctccagtcagccgtccttctaggcaccttggacctcctcctggc
ttcagtcatgtttctcctaagctagacatggaatctactgttcccgattcaattaatgga
aatcccgttatggatgactacagttggttggatggatatcagttgccttcatccaccaaa
ggtttagcccccaatggtcctattacttacactcaatcaaattcccagcaagtaaataac
aatattttgagtgggacagcttcctttccctttcctggaaaacaagttccatctgcactg
caggggcccatacagaatggttggcaagattatcatacttccgagcttttaaaagctcat
catcaacagcaactgcagccacaacaaccactcgcaaatggaaatcaacattttactcca
ctgcctgagcaatttcaaggacagtcaatctggacaggtcgttacttggtgtga

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