Trifolium pratense (red clover): 123924688
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Entry
123924688 CDS
T08949
Name
(RefSeq) auxin response factor 19-like isoform X1
KO
K14486
auxin response factor
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123924688
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
123924688
NCBI-ProteinID:
XP_045833600
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All DBs
Position
LG4:complement(58777057..58784544)
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AA seq
1125 aa
AA seq
DB search
MKAPSNGYLPNSGEGERKAINSELWHACAGPLVSIPPVGSLVVYFPQGHSEQVAASMQKE
ADFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAMLASDMGLKQNQ
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRSSRQQPALSSSVIS
SDSMHIGILAAAAHAASNNSPFTVFYNPRTSPCEFVIPLAKYNKALYTHVSLGMRFRMMF
ETEDSGVRRYMGTITGISDLDPARWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTP
FYICPPPFFRPKFPKQPGMPEDESEIENAFKRAMPWLGDELGMKDASSSIFPGLSLVQWM
SMQQNNNQFSAPQSGLLPPSMLSSNTMHATLNTDDPSKILNFQSPAGLSAPSLQFNKPNL
PNQVNQLQQSPNAWSQQQQQQQKMLSMLQTPLNQLQQQQQQQQRQHQLAGPQNLPQTQQQ
QPQLTQPNAHQPQQQQHQQLQQQQHQQPNQNTTMNNGTVGSNQMPNQCVQQPVTYSPLQQ
QLLSGNVQTQQNFQSVGKNGLIMTSLPQDSQFQQQIDQQQQAGLLQRQQQQQQQTQLQQS
SLQLLQQSMLQRAPQQSQMTQISPKNTSDQQQQMQLLQKLQQQQQPLSTSSPLSQSQLLQ
QQNQQPQQPMSQHHQHQQPQQLGNNAFSMEKLLNNNYSSSAVMHPQQLPVNNHHNTQKSP
TNTRAPSAFTDGDAPSCSTSPSTNNCQTSPPNLLKRNQPEPFGGPLIVETNTNMMQELQS
KSDMQNKHELQGVKGPDKQKYKGAINDQMEASSGTSYGIDPGNIHQNFPLSNFYMDSDVH
SQQPRSNLPFASNLDGLTPDPLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTADISSQS
FGVPNMSFKPGCSSDIAIPDTGVMNNGLWSNQAQRMRTYTKVQKCGSVGRCIDVTRYKGY
EELRNDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSA
EVQQMSLEGDLGYVPITNQACSGSESGNAWRAQQYDDNSAASFNR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctccttctaatggttatttgcctaattctggtgaaggtgaaaggaaagccatc
aattcagagttatggcatgcttgtgccgggcccttggtttctatacctcccgttggaagt
cttgttgtttactttcctcaaggacatagtgagcaagttgcagcatccatgcaaaaggag
gcagatttcataccaagttaccctaaccttccatccaagttgatttgcatgcttcacaat
gttgcgctacatgctgaccctgaaactgatgaggtatatgcacagatgacccttcaacct
gtaaataaatatgacaaggaagcaatgcttgcttcagacatgggactaaaacaaaaccag
caaccaactgaattcttttgcaaaacactaacagctagtgacactagcactcacggtgga
ttttcagtacctcgtagagctgccgagaaaatattcccacctctggacttttcaatgcaa
ccaccagctcaagaaatagttgccaaagatttgcatgacactacatggacgtttagacat
atttatcgcggacaaccaaagaggcatctattgactactggttggagtgtctttgttagt
acgaaaaggctctttgccggagattctgttctttttatcagagatgaaaagcagcaactt
cttttaggtataaagagatccagtagacagcaaccagcgctatcttcatcggtaatatca
agtgatagcatgcatattggcattcttgccgctgcggctcatgctgcttcgaataatagc
ccatttactgtattttataatcccaggactagcccctgtgaatttgtgattccattggcc
aagtataataaagcactgtacactcatgtttctcttggaatgagattcagaatgatgttt
gagaccgaggattcaggagtacgcagatatatgggcacaatcactgggatcagtgacttg
gatcctgccagatggaaaaattcacaatggcgtaatcttcaggttggatgggatgaatct
acagctggtgagcgcccaagcagagtttcaatttgggatattgaacctgttgtgacccct
ttctacatttgcccccctccattttttaggccaaagttccccaagcaaccaggaatgcca
gaagacgagtctgaaatagaaaatgctttcaagagagctatgccgtggcttggagatgaa
ctcggcatgaaagatgcctcaagttcaatcttccctggtttgagtttagtccaatggatg
agcatgcagcagaataataatcagttttctgctcctcaatcaggacttttacctccatcc
atgctttcatcaaacacaatgcatgctacccttaacaccgatgatccatccaagatattg
aactttcaatcccctgctggactctctgctccaagtcttcaatttaacaaacctaattta
ccaaaccaagtcaatcaattgcaacagtcgccgaatgcgtggtctcaacagcaacaacag
cagcagaagatgctgtcgatgttgcaaacaccgttaaaccagctgcagcaacaacaacag
cagcagcagaggcaacatcaactggctggaccacaaaacctgccgcagactcagcaacaa
cagccccaactgactcaaccgaacgcacatcagcctcaacaacagcaacaccaacaacta
caacaacagcaacaccaacagccgaatcaaaacaccactatgaataatggaacagttggt
tctaaccagatgccgaatcagtgtgtacagcaacctgtaacgtactctccccttcagcaa
cagttgctctcaggaaatgtccaaacccaacaaaatttccagtcagttggcaagaacggg
ttgataatgacatccttaccgcaggactcgcaatttcagcaacagatagaccaacaacaa
caagctggtctcttacagcggcagcagcagcagcaacaacaaacacagttgcaacaatct
tcattacagttattgcaacaaagcatgttacaaagagcgccacagcaatcacaaatgact
cagatttcgccgaaaaacacctcagaccaacaacaacagatgcagttgctacagaagttg
cagcaacaacagcaaccactttccacatcttccccactttcgcagtctcagcttctgcag
caacaaaaccagcaaccgcagcagcctatgtcacagcatcatcagcatcaacagccgcaa
cagctcggtaacaatgcattctcaatggagaagcttctcaacaacaattactcttcttca
gctgtcatgcatccgcagcagcttcctgtgaacaatcaccataatacacaaaaatcaccg
acaaatactagagctccttccgcttttacagatggagatgccccatcatgctcaacttcg
ccatctactaataactgtcagacatcgcctccaaacctcctgaaaagaaatcaaccagag
ccatttggagggcctttgatagttgaaaccaatactaatatgatgcaggagcttcaaagt
aagtctgacatgcagaacaaacacgaattacaaggtgtaaaaggacctgacaagcaaaag
tacaaaggggctatcaatgatcagatggaggcttcttccggaacatcttacggtattgat
cctggcaacatccaccaaaactttccactttccaacttctacatggatagtgatgtccac
tcgcaacaaccaagaagtaacttaccatttgcctctaaccttgatggattaacacctgat
cctttgctctcacgagggtatgattctcaaaaagatcttcaaaacttgttgtctaattat
ggtggtgctccaagagatattgaaactgagctgtccactgctgatattagttcacagtcg
tttggtgtgccgaacatgtcttttaagccaggatgctcaagtgatattgctatccctgat
actggcgttatgaataatggcttgtggtctaatcaggctcagcgaatgcgaacatatact
aaggttcaaaaatgtggctcggtcggaagatgtattgatgtcacccgttacaaaggatat
gaagaactccggaatgatttggctcgtatgtttgggattgaagggcagctagaagatcct
ctaaggactgactggaaactagtatatgtggatcacgaaaacgacattcttctcgtcggc
gatgacccttgggaagaatttgtaaactgtgttcaaagcataaagatactatcatctgct
gaagtacaacaaatgagcctagaaggcgacttaggttatgttccaatcaccaatcaagct
tgtagtggttcagaaagtggtaatgcatggagggcacaacagtatgatgataactctgca
gcctcgtttaatcgataa
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