Trifolium pratense (red clover): 123924785
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Entry
123924785 CDS
T08949
Name
(RefSeq) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00541
Biosynthesis of various nucleotide sugars
tpra01100
Metabolic pathways
tpra01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
123924785
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tpra01005
]
123924785
Enzymes [BR:
tpra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
123924785
Lipopolysaccharide biosynthesis proteins [BR:
tpra01005
]
Lipid A
123924785
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-GeneID:
123924785
NCBI-ProteinID:
XP_045833711
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Position
LG4:complement(12647771..12653145)
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AA seq
289 aa
AA seq
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MDPSLLYDQLKAADPFFLLAGPNVIESEEHIMRMAKHIKTISSKFGIPLVFKSSFDKANR
TSSKSFRGPGMVEGLKILEKVKIAYDLPIVTDVHEAIQCEPVGKVADIIQIPAFLCRQTD
LLVAAAKTGKIINIKKGQFCAPSVMTNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRN
LEWMREANCPIVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFMEV
HDDPLNAPVDGPTQWPLRHLEELLEELIAISRVSKGKKPFKIDLTPFRE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatccctcattactctatgaccagctcaaggctgcagacccgttttttctgctagct
ggtcccaatgtgattgaatcagaggagcacattatgcgaatggctaagcatatcaagact
atttcatctaaatttggaattccattggttttcaaatcaagctttgacaaagctaaccgg
acatcatcaaaatcatttcgtggcccggggatggttgagggattgaagatacttgagaag
gttaaaatagcttacgacctccctatagtgacagatgtgcatgaggccatccagtgtgaa
ccagttggcaaagttgcagatatcattcagattccagcattcttatgtcgccaaacagat
cttctagttgcagcagccaaaactgggaagattatcaatatcaagaaaggccagttctgt
gctccttcggtgatgacaaattcagcggaaaaggttcggttagctggaaatcctaatgtg
atggtttgcgagagaggaacaatgtttggctataatgatttaattgttgatccacgtaac
ctggagtggatgagagaagccaattgtcctattgtagctgatataacccactcactacaa
caacctgctggaaagaagttggatggaggaggtgttgcaagtggaggtcttcgagaacta
ataccttgcattgcaaggacatcagtcgcagttggagtggatgggatcttcatggaggtg
catgacgatccgctgaatgcaccagtagatggtccaacacagtggcctttgcgccacttg
gaggaattacttgaagagcttattgctatatctagggtaagcaaagggaagaagccattt
aagattgatctcacgccgtttcgtgaataa
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