Trifolium pratense (red clover): 123924878
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Entry
123924878 CDS
T08949
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
123924878
04980 Cobalamin transport and metabolism
123924878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123924878
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
123924878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
TMEM237
Uso1_p115_C
DUF7801
FapA
Motif
Other DBs
NCBI-GeneID:
123924878
NCBI-ProteinID:
XP_045833813
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Position
LG4:6978201..6989543
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AA seq
510 aa
AA seq
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MGDFNLALVIVAIVVCIIVFIFNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILML
PADVANRHACRHAIYNGACNLTLPMKDLWLAVYILDAILVFFVIPFAMFYYEGDQDKSIG
KRIKSALCWMVTTTIVCALVLGILYGLIGKVDFTVRHLSSSTSSFPGSWQQFNSGQECIG
TGTRQCSAYSASPSSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSF
IRRPKAVITRSQYIKEATELGKKAKELKKAAESLHQEERAGSKGRKFRKNVKSVEKELFQ
LEEDVKLLEEMYPQGEQAETTWALTVLGYLAKFVLGILGLIVSVAWIAHIIIYLLINPPL
SPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGGTLM
NSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIA
FVILAGLTFVYYAACGWRRKKPSGKFQLST
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcaacttagcactagtaatcgtagcgatcgttgtatgcataatcgtgttc
atcttcaatgtctaccttcttgttaactaccaacatcccgatgacgttaatcaagcttac
ttccctaaattcgtcgtcgttttgggtctctctgttgcagccatttcaattctcatgctc
cccgccgatgtggctaaccggcatgcttgtcgtcatgccatttataatggagcgtgtaat
ctcacactccccatgaaagatctttggcttgcggtttatatccttgacgctattcttgtt
ttcttcgttattccgtttgcaatgttttactatgaaggtgaccaagataagagtattggg
aagaggattaagagtgcgttgtgctggatggtgacaactactattgtgtgtgctctcgtt
ttgggtattttgtatgggcttattgggaaggtcgattttactgtgaggcatttgtcttct
tccacaagctcatttcctggctcatggcaacaattcaatagtggtcaagagtgtattgga
actggcacccgtcagtgctctgcatactcggctagtccttcgtcagagaaaacttggact
atgcgcactacctttccagaatatgttgttgctcttgctactattgttggatctgtgctt
ttctctatatttggtggtgttggtattgcttgtcttccattgggacttatattttcattt
attcggcgtccaaaggctgttatcactcgctcacaatatatcaaggaagcaactgaactg
ggtaaaaaggcaaaagaactaaagaaagcagctgagtcacttcatcaagaagaaagagct
ggttcaaagggtaggaaatttcgaaaaaatgtgaaatcggtggaaaaggagttgtttcaa
ttagaagaagatgtaaagcttcttgaggagatgtatccacaaggggagcaggctgagaca
acatgggcactaacagttcttggatatctggcaaaatttgttttaggaattttaggactt
attgtttctgtggcatggattgctcatatcattatctacctattaattaatcctcctctt
tctcctttcctgaatgaagttttcatcaagctagatgatatatggggtcttctgggtact
gctgcatttgcatttttctgcttctaccttctccttgccgtgattgctggtgccatgatg
cttgggctgagactagtttttattactatacatcccatgaagtggggagggactctcatg
aactctttcctgttcaatgttggacttatccttctttgctctatcagtgtgatccagttc
tgctccacagcatttgcctactatgctcaagcaactgcagcacaggaaatatttggccac
actttggagtctcttcgtggaattaaatatttgtacaagtacaatgtatttcagattgca
tttgttattttggctggattgacttttgtttattatgctgcgtgtggatggagaagaaag
aagcctagtggcaagttccagttgtctacataa
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