Trichogramma pretiosum: 106648201
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Entry
106648201 CDS
T07644
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106648201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106648201
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106648201
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106648201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106648201
NCBI-ProteinID:
XP_014220380
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MANLNFEQPPRSLTNTSLAQRGVSSGNSLNSSTLAGHVTPTSGMFSGSSTSAPGATNSSV
IGPNLSYHPGGTTSGIGSVQTSSNHQAQQQQHQQQLSPMNSRGLFGQRAFTGDRRNMPTL
GNTNPMGGMSNFGIPQNRSYGSQNTISSFHSAFGSGSGGGGDTSTPPILDLSEFPSLTNR
GQGDSSMPQPSPMPGKQPYVSFKFSSVGMVKQPTSESSEFTMSSEDFPALPGTQNRDGPS
PGGSGLQSEKNMNVGLGPELNPDVLQSNRSASEKAQSAKKGIQTSPDGKVTNIPASMVKD
QFGMVGLLTFIRAAETDPNLVTLALGQDLTALGLNLNSPDNLYQNFGGPWAETPCRPQDI
DFHVPPEYLINSSIRDKLAPVKLNRYKDDLLFYMFYTNCGDVLQLAAAAELYTREWRYHM
EEKVWITQAQGLEPEEKTATYERGTYYYFDAQNWRKVAKEFHLEYSKLEGRPHLPSSFHQ
AQP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttgaattttgaacagccaccaagaagcttgactaataccagcttagcacag
cgtggagttagcagtggaaatagtctcaacagttcgaccctagcgggtcatgtcactcct
acatcaggaatgttttccggatcgtcaactagtgcaccaggtgcaacaaattcttcagtt
attggacccaatttatcctatcatcccggtggtacaacctctggaattggtagtgtacaa
acgagctccaatcatcaggcacagcaacagcaacatcaacagcagctatctcctatgaat
agtaggggattatttggacagagagcatttactggcgatagacgtaacatgcctacttta
ggcaacactaacccaatgggtggtatgagcaattttggcatacctcaaaatcgtagctac
ggatctcaaaataccatcagtagttttcattcagcatttggcagtgggtcaggcgggggt
ggtgatacaagtacacctcctatattagacttatccgagtttccttcattaactaataga
ggccaaggagattcctccatgccccaacctagtccaatgccaggcaaacaaccatacgtt
tcatttaaattctcttcagttggaatggtgaagcagcctacatcggaatcaagtgaattc
acaatgagttcagaggactttcctgcgttaccaggaacacaaaatagagatggtccatcg
ccgggtggtagtgggttgcagagtgaaaaaaatatgaatgttggtttaggtccagaatta
aatccagacgtattacaatccaatagatctgcttctgaaaaagcgcaatctgcgaaaaaa
ggcattcaaacgagtccagatggtaaagtgacgaacataccagcgagtatggtcaaagat
caattcggaatggtaggactattaacgtttatcagagcagcggaaacggatccaaacctc
gtaacactagcactaggtcaagatctcacggcgcttggactgaatttaaactcgcccgat
aatttgtatcaaaatttcggtggtccctgggcggaaacgccctgccggccacaggacata
gactttcacgttccacccgagtacctcattaattcatccatcagggacaaactggcacct
gttaagttaaatcgatataaggacgatctcttattctacatgttttatacgaactgtggg
gatgtcttgcaattggcagcagcagcagaattgtatactcgagaatggcggtaccatatg
gaagaaaaagtgtggataacgcaagcgcaaggtttagaacccgaagaaaaaacagctacg
tacgagcgtggtacttattactactttgatgcgcaaaattggcgcaaagtggcaaaagaa
ttccatctagagtactcaaaattggaaggtaggcctcacctgcctagcagcttccatcaa
gctcagccttga
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