Trichogramma pretiosum: 106648382
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Entry
106648382 CDS
T07644
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106648382
09123 Folding, sorting and degradation
03018 RNA degradation
106648382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106648382
03041 Spliceosome [BR:
tpre03041
]
106648382
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106648382
mRNA degradation factors
5'-3' decay
Lsm complex
106648382
Spliceosome [BR:
tpre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106648382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
106648382
NCBI-ProteinID:
XP_014220730
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLESFVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTNRGVEQVVLGLH
IIRGDNVAIVGEVDDEMDARMDLSVIRAEPLSAVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcttggagagttttgtgaatcataccgtctctatcattacgtccgatggt
cgaaattttatcggtactttgaaaggttttgatcaaactatcaacttaattttggatgaa
tctcacgaaagagtctacagcactaatcgtggagttgaacaagtagttttaggtcttcat
atcattagaggagacaatgtagccatagttggggaagtagacgatgaaatggatgctcgt
atggatttgtctgtcataagagctgaacctttgagcgctgtagctcattaa
DBGET
integrated database retrieval system
